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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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MSH5
mutS homolog 5
Chromosome 6 · 6p21.33
NCBI Gene: 4439Ensembl: ENSG00000204410.16HGNC: HGNC:7328UniProt: A0A024RCM1
65PubMed Papers
2Diseases
0Drugs
7Pathogenic Variants
FUNCTIONAL ROLE
DNA Repair
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingdouble-stranded DNA bindingchiasma assemblynucleusPremature ovarian failure 13Spermatogenic failure 74
✦AI Summary

MSH5 is a meiosis-specific MutS homolog that functions as a core component of the MutSγ (MSH4-MSH5) complex, essential for meiotic recombination and crossover formation 1. MSH5 binds branched recombination intermediates and directly stimulates the MLH1-MLH3 endonuclease to process Holliday junctions, facilitating reciprocal DNA exchange between homologous chr6 1. The protein is highly expressed in testis and thymus, with interactions with MSH4 protein demonstrated across eukaryotic species 2. MSH5 mutations cause severe reproductive dysfunction: pathogenic variants in MSH5 are associated with premature ovarian insufficiency (POI) and non-obstructive azoospermia (NOA) 34. In NOA patients with MSH5 defects, all individuals showed unsuccessful sperm retrieval, indicating complete meiotic failure 4. Oligogenic variants combining MSH4 and MSH5 mutations associate with earlier POI onset and increased amenorrhea prevalence compared to monogenic defects 5. Transcriptionally, MSH5 expression is regulated by HSF5, a meiotic progression factor controlling crossover formation genes 6. These findings establish MSH5 as critical for successful meiosis and indicate genetic screening utility for infertility diagnosis.

Sources cited
1
MSH4-MSH5 (MutSγ) binds recombination intermediates and stimulates MLH1-MLH3 endonuclease activity to process Holliday junctions for crossover formation
PMID: 32814904
2
Human MSH5 is located at 6p22.3-p21.3, highly expressed in testis and thymus, and interacts with MSH4 protein
PMID: 9787078
3
MSH5 is implicated in nonsyndromic POI through meiosis/DNA repair pathways
PMID: 34794894
4
MSH5 mutations cause non-obstructive azoospermia with unsuccessful sperm retrieval in all affected individuals
PMID: 35172124
5
Digenic heterozygous variants in MSH4 and MSH5 are associated with early-onset POI and increased primary amenorrhea
PMID: 36793102
6
MSH5 transcription is regulated by HSF5 as part of meiotic progression control mechanisms
PMID: 38958533
Disease Associationsⓘ2
Premature ovarian failure 13UniProt
Spermatogenic failure 74UniProt
Pathogenic Variants7
NM_172166.4(MSH5):c.2071C>T (p.Arg691Ter)Likely pathogenic
MSH5-related disorder
★☆☆☆2023→ Residue 691
NM_172166.4(MSH5):c.1857del (p.Ala620fs)Pathogenic
Non-obstructive azoospermia|Spermatogenic failure 74
★☆☆☆2021→ Residue 620
NM_172166.4(MSH5):c.964C>T (p.Arg322Cys)Likely pathogenic
Non-obstructive azoospermia|Spermatogenic failure 74
★☆☆☆2021→ Residue 322
NM_172166.4(MSH5):c.75dup (p.Ser26fs)Pathogenic
Non-obstructive azoospermia|Spermatogenic failure 74
★☆☆☆2020→ Residue 26
NM_172166.4(MSH5):c.1459G>T (p.Asp487Tyr)Pathogenic
Premature ovarian failure 13
☆☆☆☆2022→ Residue 487
NM_172166.4(MSH5):c.537+1G>APathogenic
Azoospermia
☆☆☆☆2021
NM_172166.4(MSH5):c.826C>T (p.Arg276Cys)Likely pathogenic
Genetic non-acquired premature ovarian failure
☆☆☆☆2019→ Residue 276
View on ClinVar ↗
Related Genes
PMS1Protein interaction100%EXO1Protein interaction100%MSH6Protein interaction100%RAD51Protein interaction99%BRCA2Protein interaction98%MLH1Protein interaction97%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
Click a node to explore
MSH5PMS1EXO1MSH6RAD51BRCA2MLH1
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt O43196
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.85LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.70 [0.58–0.85]
RankingsWhere MSH5 stands among ~20K protein-coding genes
  • #7,186of 20,598
    Most Researched65
  • #3,206of 5,498
    Most Pathogenic Variants7
  • #7,324of 17,882
    Most Constrained (LOEUF)0.85
Genes detectedMSH5
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Genetics of ovarian insufficiency and defects of folliculogenesis.
PMID: 34794894
Best Pract Res Clin Endocrinol Metab · 2022
1.00
2
Whole-exome sequencing improves the diagnosis and care of men with non-obstructive azoospermia.
PMID: 35172124
Am J Hum Genet · 2022
0.90
3
Next-generation sequencing of 500 POI patients identified novel responsible monogenic and oligogenic variants.
PMID: 36793102
J Ovarian Res · 2023
0.80
4
Regulation of the MLH1-MLH3 endonuclease in meiosis.
PMID: 32814904
Nature · 2020
0.70
5
HSF5 Deficiency Causes Male Infertility Involving Spermatogenic Arrest at Meiotic Prophase I in Humans and Mice.
PMID: 38958533
Adv Sci (Weinh) · 2024
0.60