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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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NAA50
N-alpha-acetyltransferase 50, NatE catalytic subunit
Chromosome 3 · 3q13.31
NCBI Gene: 80218Ensembl: ENSG00000121579.14HGNC: HGNC:29533UniProt: E7EQ69
73PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein-N-terminal amino-acid acetyltransferase activityprotein bindinghistone H4 acetyltransferase activitynucleusmusculoskeletal system diseaseupper respiratory tract disorderAbnormality of the skeletal systemhepatocellular carcinoma
✦AI Summary

NAA50 is the catalytic subunit of the NatE N-alpha-acetyltransferase complex, functioning as a co-translational protein modifier with broad substrate specificity 1. It acetylates the N-terminus of proteins retaining their initiating methionine, except those with proline at the second position, and can acetylate all MXAA peptides except MPAA 1. NAA50 associates with NAA10 and NAA15 to form NatE complexes, which collectively contribute to major N-terminal acetylation at the ribosome exit tunnel 1. NAA50 negatively regulates NAA10 acetylation activity through structural alteration of substrate-binding sites 2. Beyond protein acetylation, NAA50 exhibits serotonin N-acetyltransferase activity and participates in melatonin biosynthesis 3. NAA50 is essential for sister chr3 cohesion during mitosis by promoting CDCA5/sororin binding to cohesin, potentially counteracting NAA10 function 4. Pan-cancer analysis reveals NAA50 is overexpressed in most cancers with significant prognostic implications, correlating with increased MDSC infiltration and reduced T cell/NK infiltration; knockout studies demonstrate NAA50 promotes cell proliferation in lung adenocarcinoma 5. NAA50 also displays lysine-ε-acetyltransferase activity with unclear physiological relevance 2.

Sources cited
1
NAA50 acetylates N-terminus of proteins with initiating methionine (except proline at position 2), and NatE complex provides major N-terminal acetylation at ribosome exit tunnel
PMID: 27484799
2
NAA50 negatively regulates NAA10 activity through structural alteration of substrate-binding sites within NatE complex
PMID: 32042062
3
NAA50 has serotonin N-acetyltransferase activity and is involved in melatonin biosynthesis
PMID: 36829878
4
NAA50 is required for sister chromatid cohesion during mitosis by promoting CDCA5/sororin binding to cohesin
PMID: 17502424
5
NAA50 is overexpressed in most cancers, correlates with prognosis and immune infiltration patterns, and promotes cell proliferation in lung adenocarcinoma
PMID: 36568377
Disease Associationsⓘ20
musculoskeletal system diseaseOpen Targets
0.28Weak
upper respiratory tract disorderOpen Targets
0.13Weak
Abnormality of the skeletal systemOpen Targets
0.12Weak
hepatocellular carcinomaOpen Targets
0.07Suggestive
nasopharyngeal carcinomaOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.06Suggestive
Alzheimer diseaseOpen Targets
0.06Suggestive
benign prostatic hyperplasiaOpen Targets
0.06Suggestive
lymphatic malformation 11Open Targets
0.05Suggestive
hereditary angioedemaOpen Targets
0.04Suggestive
hereditary angioedema with normal C1InhOpen Targets
0.04Suggestive
LipedemaOpen Targets
0.04Suggestive
type 2 diabetes mellitusOpen Targets
0.04Suggestive
lymphatic malformation 8Open Targets
0.04Suggestive
lymphatic malformation 14Open Targets
0.03Suggestive
Milroy diseaseOpen Targets
0.03Suggestive
diabetes mellitusOpen Targets
0.03Suggestive
osteoporosis-pseudoglioma syndromeOpen Targets
0.03Suggestive
neuroblastomaOpen Targets
0.03Suggestive
lymphatic malformation 7Open Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
NAA15Protein interaction100%NAA10Protein interaction100%HYPKProtein interaction100%NAA16Protein interaction100%NAA20Protein interaction93%NAA35Protein interaction92%
Tissue Expression6 tissues
Brain
100%
Heart
78%
Bone Marrow
76%
Lung
68%
Liver
66%
Ovary
52%
Gene Interaction Network
Click a node to explore
NAA50NAA15NAA10HYPKNAA16NAA20NAA35
PROTEIN STRUCTURE
Preparing viewer…
PDB6WFN · 1.07 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.77LoF Tolerant
pLIⓘ
0.33Tolerant
Observed/Expected LoF0.41 [0.23–0.77]
RankingsWhere NAA50 stands among ~20K protein-coding genes
  • #6,484of 20,598
    Most Researched73
  • #6,166of 17,882
    Most Constrained (LOEUF)0.77
Genes detectedNAA50
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Human Naa50 Protein Displays Broad Substrate Specificity for Amino-terminal Acetylation: DETAILED STRUCTURAL AND BIOCHEMICAL ANALYSIS USING TETRAPEPTIDE LIBRARY.
PMID: 27484799
J Biol Chem · 2016
1.00
2
Human Naa50 Shows Serotonin
PMID: 36829878
Antioxidants (Basel) · 2023
0.90
3
Pan-cancer analysis reveals NAA50 as a cancer prognosis and immune infiltration-related biomarker.
PMID: 36568377
Front Genet · 2022
0.80
4
Molecular basis for N-terminal acetylation by human NatE and its modulation by HYPK.
PMID: 32042062
Nat Commun · 2020
0.70
5
Structure and Mechanism of Acetylation by the N-Terminal Dual Enzyme NatA/Naa50 Complex.
PMID: 31155310
Structure · 2019
0.60