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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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NBAS
NBAS subunit of NRZ tethering complex
Chromosome 2 · 2p24.3
NCBI Gene: 51594Ensembl: ENSG00000151779.15HGNC: HGNC:15625UniProt: A2RRP1
83PubMed Papers
22Diseases
0Drugs
245Pathogenic Variants
FUNCTIONAL ROLE
Transporter
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
SNARE bindingprotein bindingnuclear-transcribed mRNA catabolic processretrograde vesicle-mediated transport, Golgi to endoplasmic reticuluminfantile liver failure syndrome 2short stature-optic atrophy-Pelger-Huët anomaly syndromeinfantile liver failureacute infantile liver failure due to synthesis defect of mtDNA-encoded proteins
✦AI Summary

NBAS (neuroblastoma-amplified sequence) is a subunit of the NRZ tethering complex involved in Golgi-to-endoplasmic reticulum (ER) retrograde vesicular transport 1. It functions in SNARE assembly at the ER and maintains protein stability within the secretory pathway 2. NBAS is essential for normal vesicular trafficking in high-secretory organs including hepatocytes, bone-forming cells, and immune cells. Biallelic NBAS variants cause recurrent acute liver failure (RALF), typically triggered by febrile infections, representing one of the most frequent genetic causes identified in pediatric liver failure cohorts 3. NBAS deficiency accounts for 7.7% of genetically diagnosed indeterminate pediatric acute liver failure cases 3. Disease manifestations extend beyond isolated hepatic crises to include skeletal abnormalities (osteopenia, dysplasia), short stature, and optic nerve atrophy 2. Recently, NBAS was identified as the second most frequently mutated gene (2.11%) in pediatric hemophagocytic lymphohistiocytosis, where impaired lytic granule polarization in NK cells disrupts cytotoxic degranulation 4. Pathophysiologically, NBAS deficiency impairs retrograde vesicular trafficking, compromising membrane recycling and autophagy, while also impairing antegrade transport causing deficient collagen and insulin secretion 1. This results in increased ER stress leading to hepatocellular death during infections 1. Liver transplantation effectively halts RALF recurrence, though timing remains critical to minimize complications 5.

Sources cited
1
NBAS defects are the most frequent genetic cause of indeterminate pediatric acute liver failure (20 of 97 diagnosed cases); NBAS variants account for disorders of vesicular trafficking category
PMID: 37976411
2
NBAS is involved in antegrade and retrograde vesicular trafficking; NBAS-associated disease causes recurrent acute liver failure triggered by febrile infections with frequency and severity decreasing with age; pathophysiology involves increased ER stress in hepatocytes
PMID: 38279772
3
NBAS variants cause broad phenotypic spectrum from isolated recurrent liver failure to multisystemic syndrome including short stature, skeletal osteopenia/dysplasia, optic atrophy; novel NBAS variants demonstrate altered Golgi-to-ER retrograde trafficking and reduced collagen secretion
PMID: 32768688
4
NBAS is involved in cytotoxic degranulation; biallelic NBAS variants cause hemophagocytic lymphohistiocytosis through impaired NK-cell cytotoxicity and lytic granule polarization; NBAS is second most frequently mutated gene in HLH cohort (2.11%)
PMID: 35902954
5
Liver transplantation is effective for treating acute liver failure in NBAS deficiency; patients present with fever-triggered recurrent liver failure; post-transplant outcomes vary with complications possible but recurrence prevented
PMID: 36594124
Disease Associationsⓘ22
infantile liver failure syndrome 2Open Targets
0.82Strong
short stature-optic atrophy-Pelger-Huët anomaly syndromeOpen Targets
0.80Strong
infantile liver failureOpen Targets
0.55Moderate
acute infantile liver failure due to synthesis defect of mtDNA-encoded proteinsOpen Targets
0.54Moderate
Acute infantile liver failure-multisystemic involvement syndromeOpen Targets
0.53Moderate
major depressive disorderOpen Targets
0.43Moderate
Retinal dystrophyOpen Targets
0.40Moderate
ImmunodeficiencyOpen Targets
0.37Weak
immune system diseaseOpen Targets
0.37Weak
Leber congenital amaurosisOpen Targets
0.37Weak
developmental disabilityOpen Targets
0.37Weak
immunodeficiency diseaseOpen Targets
0.37Weak
Increased susceptibility to fracturesOpen Targets
0.37Weak
Neurodevelopmental disorderOpen Targets
0.37Weak
smoking initiationOpen Targets
0.31Weak
mathematical abilityOpen Targets
0.30Weak
placenta praeviaOpen Targets
0.28Weak
diabetes mellitusOpen Targets
0.23Weak
mouth diseaseOpen Targets
0.23Weak
genetic disorderOpen Targets
0.20Weak
Infantile liver failure syndrome 2UniProt
Short stature, optic nerve atrophy, and Pelger-Huet anomalyUniProt
Pathogenic Variants245
NM_015909.4(NBAS):c.1741C>T (p.Arg581Ter)Pathogenic
Short stature-optic atrophy-Pelger-Huët anomaly syndrome;Infantile liver failure syndrome 2|not provided|Fetal anomalies with a likely genetic cause
★★☆☆2026→ Residue 581
NM_015909.4(NBAS):c.2827G>T (p.Glu943Ter)Pathogenic
not provided|Infantile liver failure syndrome 2|Infantile liver failure syndrome 2;Short stature-optic atrophy-Pelger-Huët anomaly syndrome|Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins
★★☆☆2026→ Residue 943
NM_015909.4(NBAS):c.3333_3334del (p.Cys1112fs)Pathogenic
Retinal disorder|not provided
★★☆☆2026→ Residue 1112
NM_015909.4(NBAS):c.6840G>A (p.Thr2280=)Pathogenic
Infantile liver failure syndrome 2|Short stature-optic atrophy-Pelger-Huët anomaly syndrome|not provided|Thyroid cancer, nonmedullary, 1|Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins
★★☆☆2026→ Residue 2280
NM_015909.4(NBAS):c.2950del (p.Ile984fs)Pathogenic
not provided|Infantile liver failure|Infantile liver failure syndrome 2;Short stature-optic atrophy-Pelger-Huët anomaly syndrome|Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins|Monogenic short statue
★★☆☆2026→ Residue 984
NM_015909.4(NBAS):c.4753C>T (p.Arg1585Ter)Pathogenic
not provided|Infantile liver failure syndrome 2;Short stature-optic atrophy-Pelger-Huët anomaly syndrome|Short stature-optic atrophy-Pelger-Huët anomaly syndrome
★★☆☆2026→ Residue 1585
NM_015909.4(NBAS):c.173-2A>GLikely pathogenic
not provided|NBAS-related disorder|Infantile liver failure syndrome 2;Short stature-optic atrophy-Pelger-Huët anomaly syndrome
★★☆☆2026
NM_015909.4(NBAS):c.5741G>A (p.Arg1914His)Pathogenic
Short stature-optic atrophy-Pelger-Huët anomaly syndrome|not provided|Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins
★★☆☆2025→ Residue 1914
NM_015909.4(NBAS):c.3970C>T (p.Gln1324Ter)Pathogenic
not provided
★★☆☆2025→ Residue 1324
NM_015909.4(NBAS):c.5547del (p.Trp1850fs)Pathogenic
See cases|Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins|not provided|NBAS-related disorder
★★☆☆2025→ Residue 1850
NM_015909.4(NBAS):c.3316C>T (p.Gln1106Ter)Pathogenic
not provided|Short stature-optic atrophy-Pelger-Huët anomaly syndrome;Infantile liver failure syndrome 2
★★☆☆2025→ Residue 1106
NM_015909.4(NBAS):c.1628_1629insA (p.Ser544fs)Pathogenic
not provided|Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins
★★☆☆2025→ Residue 544
NM_015909.4(NBAS):c.3010C>T (p.Arg1004Ter)Pathogenic
Short stature-optic atrophy-Pelger-Huët anomaly syndrome|not provided|Infantile liver failure syndrome 2;Short stature-optic atrophy-Pelger-Huët anomaly syndrome|Infantile liver failure syndrome 2
★★☆☆2025→ Residue 1004
NM_015909.4(NBAS):c.409C>T (p.Arg137Trp)Pathogenic
Infantile liver failure syndrome 2|not provided|Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins
★★☆☆2025→ Residue 137
NM_015909.4(NBAS):c.5883_5884dup (p.Leu1962fs)Pathogenic
Short stature-optic atrophy-Pelger-Huët anomaly syndrome;Infantile liver failure syndrome 2|not provided
★★☆☆2025→ Residue 1962
NM_015909.4(NBAS):c.1A>C (p.Met1Leu)Pathogenic
not provided|Short stature-optic atrophy-Pelger-Huët anomaly syndrome;Infantile liver failure syndrome 2
★★☆☆2025→ Residue 1
NM_015909.4(NBAS):c.4255del (p.Ser1419fs)Pathogenic
Infantile liver failure syndrome 2|Short stature-optic atrophy-Pelger-Huët anomaly syndrome|not provided
★★☆☆2025→ Residue 1419
NM_015909.4(NBAS):c.1726-2A>GLikely pathogenic
not provided|Acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins
★★☆☆2025
NM_015909.4(NBAS):c.1366C>T (p.Arg456Ter)Pathogenic
not provided|Short stature-optic atrophy-Pelger-Huët anomaly syndrome;Infantile liver failure syndrome 2
★★☆☆2025→ Residue 456
NM_015909.4(NBAS):c.1501C>T (p.Arg501Ter)Pathogenic
Infantile liver failure syndrome 2|not provided
★★☆☆2025→ Residue 501
View on ClinVar ↗
Related Genes
BNIP1Protein interaction100%ZW10Protein interaction100%COPB2Protein interaction100%SEC22BProtein interaction100%STX18Protein interaction100%RINT1Protein interaction100%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
94%
Heart
91%
Ovary
74%
Lung
57%
Liver
44%
Gene Interaction Network
Click a node to explore
NBASBNIP1ZW10COPB2SEC22BSTX18RINT1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt A2RRP1
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.76LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.68 [0.60–0.76]
RankingsWhere NBAS stands among ~20K protein-coding genes
  • #5,745of 20,598
    Most Researched83
  • #260of 5,498
    Most Pathogenic Variants245 · top 5%
  • #6,099of 17,882
    Most Constrained (LOEUF)0.76
Genes detectedNBAS
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Genetic landscape of pediatric acute liver failure of indeterminate origin.
PMID: 37976411
Hepatology · 2024
1.00
2
Expanding the genotypes and phenotypes for 19 rare diseases by exome sequencing performed in pediatric intensive care unit.
PMID: 34298581
Hum Mutat · 2021
0.90
3
[Liver transplantation for the treatment of acute liver failure in 3 cases with NBAS gene deficiency and literature review].
PMID: 36594124
Zhonghua Er Ke Za Zhi · 2023
0.80
4
Disorders of vesicular trafficking presenting with recurrent acute liver failure: NBAS, RINT1, and SCYL1 deficiency.
PMID: 38279772
J Inherit Metab Dis · 2025
0.70
5
The Neonatal Behavioral Assessment Scale (NBAS) and Newborn Behavioral Observations (NBO) system for supporting caregivers and improving outcomes in caregivers and their infants.
PMID: 29537066
Cochrane Database Syst Rev · 2018
0.60