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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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NCR3
natural cytotoxicity triggering receptor 3
Chromosome 6 · 6p21.33
NCBI Gene: 259197Ensembl: ENSG00000204475.11HGNC: HGNC:19077UniProt: O14931
100PubMed Papers
0Diseases
0Drugs
2Pathogenic Variants
FUNCTIONAL ROLE
Receptor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
positive regulation of natural killer cell mediated cytotoxicityNK T cell activationplasma membraneimmune response-activating cell surface receptor signaling pathway
✦AI Summary

NCR3 (natural cytotoxicity triggering receptor 3) is an NK cell-activating receptor that recognizes ligands including BAG6 and NCR3LG1 to stimulate cytotoxicity against tumor cells and infected cells 1. NCR3 engagement triggers NK cell-mediated killing and promotes dendritic cell maturation through TNFA and IFNG release 2. Beyond NK cells, NCR3 is expressed on MAIT cells and mediates intercellular communication; activated CD8+MAIT cells expressing NCR3 with high CXCR6 expression correlate with superior anti-PD-1 immunotherapy response in non-small cell lung cancer 3. NCR3 variants influence susceptibility to Plasmodium falciparum malaria and severe malarial anemia in children, with specific alleles altering NK cell-mediated parasitic immunity 4. NCR3 expression increases in autoimmune inflammation, particularly rheumatoid arthritis, where upregulation correlates with disease severity 2. Genetic polymorphisms in NCR3 (rs1052248) associate with rheumatoid arthritis disease characteristics and anti-TNF therapy response, with the AA homozygosity linked to adverse outcomes 5. The NCR3-BAG6 axis also mediates muscle-bone synchronization during aging, with exosomal BAG6 from degenerating myocytes communicating with Th17 cells via NCR3 1. Notably, NCR3 is functionally expressed in humans but represents a pseudogene in most laboratory mouse strains, limiting mouse model studies 6.

Sources cited
1
NCR3 ligand BAG6 mediates communication between degenerated myocytes and Th17 cells; NCR3 engagement on Th17 cells regulates bone-muscle aging synchronization
PMID: 38088531
2
NCR3 involvement in NK-mediated cytotoxicity and NK/dendritic cell crosstalk; NCR3 expression increased in rheumatoid arthritis blood and synovium, associated with severe inflammation
PMID: 16362817
3
NCR3 expressed on activated CD8+MAIT cells; CXCR6+CD8+MAIT cells with high NCR3 expression correlate with anti-PD-1 immunotherapy response in non-small cell lung cancer
PMID: 38698468
4
NCR3 genetic variants (rs2736191, rs11575837) alter susceptibility to Plasmodium falciparum malaria and severe malarial anemia in children through NK cell-mediated immunity
PMID: 37704951
5
NCR3 rs1052248 AA homozygosity associated with seronegative rheumatoid arthritis, younger disease onset, and poor anti-TNF therapy response; T allele protective in ankylosing spondylitis
PMID: 38714580
6
NCR3 is a functional expressed gene in humans but a pseudogene with premature stop codons in most laboratory mouse strains except Mus caroli
PMID: 15872155
Pathogenic Variants2
NC_000006.12:g.31593133C>GPathogenic
Malaria, mild, susceptibility to|Malaria, severe, susceptibility to
☆☆☆☆2022
NM_147130.3(NCR3):c.-172G>APathogenic
Malaria, severe, susceptibility to
☆☆☆☆2022
View on ClinVar ↗
Related Genes
TYROBPProtein interaction100%BAG6Protein interaction100%KIR2DL1Protein interaction97%KIR2DL3Protein interaction97%KIR2DS5Protein interaction97%KLRF1Protein interaction97%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
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NCR3TYROBPBAG6KIR2DL1KIR2DL3KIR2DS5KLRF1
PROTEIN STRUCTURE
Preparing viewer…
PDB3NOI · 1.84 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.21LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.76 [0.49–1.21]
RankingsWhere NCR3 stands among ~20K protein-coding genes
  • #4,791of 20,598
    Most Researched100 · top quartile
  • #4,322of 5,498
    Most Pathogenic Variants2
  • #12,697of 17,882
    Most Constrained (LOEUF)1.21
Genes detectedNCR3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Human NCR3 gene variants rs2736191 and rs11575837 alter longitudinal risk for development of pediatric malaria episodes and severe malarial anemia.
PMID: 37704951
BMC Genomics · 2023
1.00
2
Deciphering Immune Landscape Remodeling Unravels the Underlying Mechanism for Synchronized Muscle and Bone Aging.
PMID: 38088531
Adv Sci (Weinh) · 2024
0.90
3
CXCR6-positive circulating mucosal-associated invariant T cells can identify patients with non-small cell lung cancer responding to anti-PD-1 immunotherapy.
PMID: 38698468
J Exp Clin Cancer Res · 2024
0.80
4
The immunoglobulin superfamily ligand B7H6 subjects T cell responses to NK cell surveillance.
PMID: 38701193
Sci Immunol · 2024
0.70
5
LST1 and NCR3 expression in autoimmune inflammation and in response to IFN-gamma, LPS and microbial infection.
PMID: 16362817
Immunogenetics · 2006
0.60