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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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NCS1
neuronal calcium sensor 1
Chromosome 9 · 9q34.11
NCBI Gene: 23413Ensembl: ENSG00000107130.11HGNC: HGNC:3953UniProt: P62166
84PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
plasma membraneprotein bindingcytoplasmcytosolalcohol drinkinginsomnianeurodegenerative diseasebenign chondrogenic neoplasm
✦AI Summary

NCS1 (Neuronal Calcium Sensor 1) is a calcium-binding protein that serves as a key regulator of calcium-dependent signaling pathways in neurons and other cell types. The protein functions as a neuronal calcium sensor that modulates G protein-coupled receptor phosphorylation in a calcium-dependent manner and can substitute for calmodulin 1. NCS1 directly interacts with inositol 1,4,5-trisphosphate receptors (InsP3R1) through residues 66-110 on the suppressor domain, enhancing channel open probability and increasing intracellular calcium signaling 1. The protein also regulates phosphatidylinositol-4-kinase-B (PI4KB) activity through direct interactions, controlling PI(4)P synthesis essential for membrane remodeling processes including mitophagy and inflammation responses 2. In pathological contexts, NCS1 demonstrates significant clinical relevance across multiple diseases. The protein is overexpressed in various cancers including liver hepatocellular carcinoma, breast cancer, and melanoma, where it correlates with poor prognosis and immune infiltration patterns 3. In lung adenocarcinoma, NCS1 functions downstream of DLX1 transcription factor and upstream of c-MYC, forming a critical oncogenic axis 4. Additionally, Mendelian randomization studies have identified NCS1 as potentially involved in multiple sclerosis pathogenesis, particularly affecting blood-brain barrier integrity and oligodendrocyte function 5. These findings establish NCS1 as both a fundamental calcium signaling regulator and a clinically significant biomarker across neurological and oncological contexts.

Sources cited
1
NCS1 binds to InsP3R1 residues 66-110, enhances channel open probability, and increases intracellular calcium signaling
PMID: 31659121
2
NCS1 directly interacts with PI4KB to control PI(4)P synthesis for membrane remodeling and inflammation responses
PMID: 39768205
3
NCS1 is overexpressed in multiple cancers and correlates with poor prognosis and immune infiltration patterns
PMID: 37893139
4
NCS1 functions in the DLX1-NCS1-MYC oncogenic axis in lung adenocarcinoma
PMID: 40614386
5
NCS1 is potentially involved in multiple sclerosis pathogenesis affecting blood-brain barrier and oligodendrocyte function
PMID: 40037332
Disease Associationsⓘ20
alcohol drinkingOpen Targets
0.32Weak
insomniaOpen Targets
0.30Weak
neurodegenerative diseaseOpen Targets
0.28Weak
benign chondrogenic neoplasmOpen Targets
0.25Weak
bilirubin metabolism diseaseOpen Targets
0.13Weak
breast cancerOpen Targets
0.09Suggestive
neoplasmOpen Targets
0.08Suggestive
frozen shoulderOpen Targets
0.08Suggestive
cancerOpen Targets
0.08Suggestive
hemolytic anemiaOpen Targets
0.08Suggestive
hypertrophic cardiomyopathyOpen Targets
0.06Suggestive
Fuchs endothelial corneal dystrophyOpen Targets
0.05Suggestive
snowflake vitreoretinal degenerationOpen Targets
0.04Suggestive
Familial ocular anterior segment mesenchymal dysgenesisOpen Targets
0.04Suggestive
early-onset non-syndromic cataractOpen Targets
0.04Suggestive
isolated congenital megalocorneaOpen Targets
0.04Suggestive
megalocorneaOpen Targets
0.04Suggestive
Parkinson diseaseOpen Targets
0.04Suggestive
macular corneal dystrophyOpen Targets
0.04Suggestive
Acanthamoeba keratitisOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
PI4KBProtein interaction99%CADPSProtein interaction99%IL1RAPL1Protein interaction98%DRD2Protein interaction98%ARF1Protein interaction98%GRK1Protein interaction97%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
29%
Ovary
10%
Heart
9%
Lung
4%
Liver
3%
Gene Interaction Network
Click a node to explore
NCS1PI4KBCADPSIL1RAPL1DRD2ARF1GRK1
PROTEIN STRUCTURE
Preparing viewer…
PDB8AHY · 1.70 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.38Moderately Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.18 [0.09–0.38]
RankingsWhere NCS1 stands among ~20K protein-coding genes
  • #5,682of 20,598
    Most Researched84
  • #1,864of 17,882
    Most Constrained (LOEUF)0.38 · top quartile
Genes detectedNCS1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
The Role of NCS1 in Immunotherapy and Prognosis of Human Cancer.
PMID: 37893139
Biomedicines · 2023
1.00
2
TRPC5.
PMID: 24756705
Handb Exp Pharmacol · 2014
0.90
3
Mendelian randomization identifies proteins involved in neurodegenerative diseases.
PMID: 40037332
Brain · 2025
0.80
4
Apolipoprotein-L Functions in Membrane Remodeling.
PMID: 39768205
Cells · 2024
0.70
5
Generation of an NCS1 gene knockout human induced pluripotent stem cell line using CRISPR/Cas9.
PMID: 37984032
Stem Cell Res · 2023
0.60