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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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NDST4
N-deacetylase and N-sulfotransferase 4
Chromosome 4 · 4q26
NCBI Gene: 64579Ensembl: ENSG00000138653.10HGNC: HGNC:20779UniProt: A8K0V5
12PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
heparan sulfate proteoglycan biosynthetic processdeacetylase activityGolgi apparatusheparan sulfate N-sulfotransferase activitymathematical abilitysmoking initiationrestless legs syndromeliver disease
✦AI Summary

NDST4 (N-deacetylase and N-sulfotransferase 4) is a bifunctional enzyme catalyzing both N-deacetylation and N-sulfation of glucosamine residues in heparan sulfate biosynthesis 1. The enzyme exhibits weak deacetylase activity but high sulfotransferase activity, converting GlcNAc-containing disaccharide repeats to N-sulfated heparosan, a critical substrate for downstream heparin modifications 1. NDST4 expression is restricted to specific tissues including the brain, lung, gastrointestinal tract, pancreas, and ovary 1. In disease contexts, NDST4 functions as a putative tumor suppressor. Genetic loss of NDST4 at chromosome 4 is significantly associated with advanced colorectal cancer stages and poorer overall survival 2. Ndst4-deficient mice exhibit altered colonic epithelial homeostasis, including increased goblet cell numbers, decreased colonocyte populations, and elevated apoptosis 3, suggesting NDST4 directs biosynthesis of specific heparan sulfate proteoglycans essential for epithelial maintenance 3. Beyond cancer, NDST4 genetic variants associate with circulating resistin levels, an inflammatory marker linked to metabolic and cardiovascular disease 4. Additionally, NDST4 variants show associations with alcohol consumption phenotypes and complex neuropsychiatric disorders including bipolar disorder 56.

Sources cited
1
NDST4 is a bifunctional enzyme with weak deacetylase but high sulfotransferase activity; catalyzes N-deacetylation and N-sulfation of glucosamine in heparan sulfate; shows restricted tissue expression pattern
PMID: 11087757
2
NDST4 identified as novel candidate tumor suppressor gene at 4q26; genetic loss associated with advanced colorectal cancer stage and poorer overall survival
PMID: 23825612
3
Ndst4-deficient mice show altered colonic epithelial homeostasis with increased goblet cells, decreased colonocytes, and elevated apoptosis; NDST4 directs heparan sulfate proteoglycan biosynthesis essential for epithelial maintenance
PMID: 27793051
4
NDST4 locus associated with circulating resistin levels (inflammatory marker linked to metabolic and cardiovascular disease) through genome-wide association study
PMID: 22843503
5
NDST4 identified in epistasis interactions associated with bipolar disorder through genome-wide association analysis
PMID: 27112568
6
SNP near NDST4 (rs12108602) associated with maximum number of drinks consumed, an intermediate phenotype for alcohol dependence
PMID: 23953852
Disease Associationsⓘ20
mathematical abilityOpen Targets
0.45Moderate
smoking initiationOpen Targets
0.39Weak
restless legs syndromeOpen Targets
0.38Weak
liver diseaseOpen Targets
0.32Weak
paralytic strabismusOpen Targets
0.31Weak
connective tissue diseaseOpen Targets
0.29Weak
atrial fibrillationOpen Targets
0.28Weak
chronic obstructive pulmonary diseaseOpen Targets
0.28Weak
Alzheimer diseaseOpen Targets
0.28Weak
rheumatic diseaseOpen Targets
0.28Weak
cardiac arrhythmiaOpen Targets
0.28Weak
mixed connective tissue diseaseOpen Targets
0.28Weak
HypercholesterolemiaOpen Targets
0.25Weak
chronic laryngitisOpen Targets
0.25Weak
ovarian neoplasmOpen Targets
0.24Weak
type 2 diabetes mellitusOpen Targets
0.19Weak
gastric ulcerOpen Targets
0.19Weak
retinal degenerationOpen Targets
0.18Weak
hemorrhageOpen Targets
0.18Weak
brain cancerOpen Targets
0.17Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
NDST1Shared pathway100%NDST2Shared pathway100%NDST3Shared pathway100%GLCEShared pathway50%HS6ST3Shared pathway50%HS6ST2Shared pathway50%
Tissue Expression6 tissues
Brain
100%
Ovary
44%
Bone Marrow
2%
Heart
0%
Liver
0%
Lung
0%
Gene Interaction Network
Click a node to explore
NDST4NDST1NDST2NDST3GLCEHS6ST3HS6ST2
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q9H3R1
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.77LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.61 [0.48–0.77]
RankingsWhere NDST4 stands among ~20K protein-coding genes
  • #16,508of 20,598
    Most Researched12
  • #6,282of 17,882
    Most Constrained (LOEUF)0.77
Genes detectedNDST4
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
NDST4 is a novel candidate tumor suppressor gene at chromosome 4q26 and its genetic loss predicts adverse prognosis in colorectal cancer.
PMID: 23825612
PLoS One · 2013
1.00
2
Alteration of colonic epithelial cell differentiation in mice deficient for glucosaminyl N-deacetylase/N-sulfotransferase 4.
PMID: 27793051
Oncotarget · 2016
0.90
3
Exome Survey and Candidate Gene Re-Sequencing Identifies Novel Exstrophy Candidate Genes and Implicates
PMID: 37509153
Biomolecules · 2023
0.80
4
Genome-wide association analysis identifies TYW3/CRYZ and NDST4 loci associated with circulating resistin levels.
PMID: 22843503
Hum Mol Genet · 2012
0.70
5
Multiple isozymes of heparan sulfate/heparin GlcNAc N-deacetylase/GlcN N-sulfotransferase. Structure and activity of the fourth member, NDST4.
PMID: 11087757
J Biol Chem · 2001
0.60