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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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NIFK
nucleolar protein interacting with the FHA domain of MKI67
Chromosome 2 · 2q14.3
NCBI Gene: 84365Ensembl: ENSG00000155438.13HGNC: HGNC:17838UniProt: Q9BYG3
137PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
condensed nuclear chromosomenucleoplasmchromosomeRNA bindingrheumatic diseaseIrritabilityhead and neck malignant neoplasiaparasitic infection
✦AI Summary

NIFK (nucleolar protein interacting with the FHA domain of MKI67) is a nucleolar protein that functions as an RNA-binding protein 1 involved in cell proliferation and ribosomal biogenesis. NIFK interacts with Ki-67, the proliferation marker protein 1, and regulates cell cycle progression through multiple mechanisms. At the molecular level, NIFK promotes cancer progression via two primary pathways: (1) Ki-67-dependent cell proliferation 2, and (2) downregulation of casein kinase 1α (CK1α), which activates the oncogenic TCF4/β-catenin signaling pathway 2. In colorectal cancer specifically, NIFK silencing inhibits the MYC pathway, suppressing cell growth, metastasis, and fatty acid metabolism while promoting apoptosis 3. The lncRNA NIFK-AS1, functionally related to NIFK, operates through ceRNA networks including an NIFK-AS1/miR-637/AKT1 axis affecting HCC progression 4. Clinically, NIFK is significantly upregulated across multiple cancer types and correlates with poor prognosis 5. In hepatocellular carcinoma, high NIFK-AS1 expression predicts sorafenib resistance, while knockdown sensitizes cells to therapy 4. In colorectal cancer, NIFK expression negatively correlates with anti-tumor immune infiltration (CD8+ T cells, macrophages) 6, suggesting dual roles in both tumor cell proliferation and immune evasion. NIFK represents a pan-cancer biomarker with potential therapeutic significance 5.

Sources cited
1
NIFK (nucleolar protein interacting with the FHA domain of MKI67) is a nucleolar protein that functions as an RNA-binding protein involved in cell proliferation and ribosomal biogenesis.
PMID: 12798774
2
At the molecular level, NIFK promotes cancer progression via two primary pathways: (1) Ki-67-dependent cell proliferation , and (2) downregulation of casein kinase 1α (CK1α), which activates the oncogenic TCF4/β-catenin signaling pathway .
PMID: 26984280
3
In colorectal cancer specifically, NIFK silencing inhibits the MYC pathway, suppressing cell growth, metastasis, and fatty acid metabolism while promoting apoptosis .
PMID: 37950567
4
The lncRNA NIFK-AS1, functionally related to NIFK, operates through ceRNA networks including an NIFK-AS1/miR-637/AKT1 axis affecting HCC progression .
PMID: 34374933
5
Clinically, NIFK is significantly upregulated across multiple cancer types and correlates with poor prognosis .
PMID: 38659266
6
In colorectal cancer, NIFK expression negatively correlates with anti-tumor immune infiltration (CD8+ T cells, macrophages) , suggesting dual roles in both tumor cell proliferation and immune evasion.
PMID: 37800782
Disease Associationsⓘ20
rheumatic diseaseOpen Targets
0.29Weak
IrritabilityOpen Targets
0.15Weak
head and neck malignant neoplasiaOpen Targets
0.11Weak
parasitic infectionOpen Targets
0.10Weak
smoking initiationOpen Targets
0.10Weak
trigeminal nerve diseaseOpen Targets
0.10Weak
nephritisOpen Targets
0.10Suggestive
NephropathyOpen Targets
0.10Suggestive
brain aneurysmOpen Targets
0.10Suggestive
irritable bowel syndromeOpen Targets
0.10Suggestive
central nervous system diseaseOpen Targets
0.09Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
colorectal carcinomaOpen Targets
0.08Suggestive
lung cancerOpen Targets
0.08Suggestive
cancerOpen Targets
0.08Suggestive
Familial exudative vitreoretinopathyOpen Targets
0.07Suggestive
ovarian neoplasmOpen Targets
0.06Suggestive
retinitis pigmentosaOpen Targets
0.06Suggestive
head and neck squamous cell carcinomaOpen Targets
0.05Suggestive
neoplasmOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
MRTO4Protein interaction100%RPL31Protein interaction100%RPL30Protein interaction100%EIF6Protein interaction100%RPL23AProtein interaction100%RPL7Protein interaction100%
Tissue Expression6 tissues
Ovary
100%
Bone Marrow
97%
Brain
89%
Heart
80%
Liver
75%
Lung
65%
Gene Interaction Network
Click a node to explore
NIFKMRTO4RPL31RPL30EIF6RPL23ARPL7
PROTEIN STRUCTURE
Preparing viewer…
PDB8FKV · 2.47 Å · EM
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.82LoF Tolerant
pLIⓘ
0.15Tolerant
Observed/Expected LoF0.45 [0.27–0.82]
RankingsWhere NIFK stands among ~20K protein-coding genes
  • #3,384of 20,598
    Most Researched137 · top quartile
  • #6,924of 17,882
    Most Constrained (LOEUF)0.82
Genes detectedNIFK
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Upregulation of lncRNA NIFK-AS1 in hepatocellular carcinoma by m
PMID: 34374933
Hum Cell · 2021
1.00
2
The nucleolar protein NIFK accelerates the progression of colorectal cancer via activating MYC pathway.
PMID: 37950567
Biosci Biotechnol Biochem · 2023
0.90
3
NIFK as a potential prognostic biomarker in colorectal cancer correlating with immune infiltrates.
PMID: 37800782
Medicine (Baltimore) · 2023
0.80
4
NIFK, a Potential Prognostic and Immunological Biomarker in Pan-Cancer Analysis, Significantly Regulates Proliferation and Metastasis of Colorectal Cancer.
PMID: 38659266
Recent Pat Anticancer Drug Discov · 2025
0.70
5
Long non-coding RNA NIFK-AS1 inhibits M2 polarization of macrophages in endometrial cancer through targeting miR-146a.
PMID: 30176290
Int J Biochem Cell Biol · 2018
0.60