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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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NKIRAS1
NFKB inhibitor interacting Ras like 1
Chromosome 3 · 3p24.2
NCBI Gene: 28512Ensembl: ENSG00000197885.12HGNC: HGNC:17899UniProt: Q9NYS0
23PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cytosolRal protein signal transductionGTPase activating protein bindingGTPase activityBlackfan-Diamond anemiahypertrophic cardiomyopathyintelligencemathematical ability
✦AI Summary

NKIRAS1 is an atypical Ras-like protein that functions as a potent negative regulator of NF-κB signaling, a critical pathway in both normal cellular processes and tumorigenesis. The protein inhibits canonical NF-κB activation by preventing phosphorylation and degradation of NFKBIB (IκB), the NF-κB inhibitor, while also mediating cytoplasmic retention of the p65/RELA NF-κB subunit 1. This dual mechanism operates independently of classical GTPase activity, as both GTP- and GDP-bound NKIRAS1 forms suppress NF-κB phosphorylation. In cancer biology, NKIRAS1 acts as a tumor suppressor with broad relevance across malignancies. Reduced NKIRAS1 expression is associated with worse prognosis in multiple cancer types, particularly those lacking oncogenic RAS mutations 1. In renal cell carcinoma, NKIRAS1 expression is downregulated in 75% of tumors, with hemizygous deletions occurring in 64% of clear cell RCC samples; higher-grade tumors show lower NKIRAS1 expression 2. In lung cancer, NKIRAS1 upregulation correlates with loss of promoter methylation and methylation of regulatory microRNAs, suggesting epigenetic control 3. Clinically, NKIRAS1 emerges as a significant hub gene in kidney disease pathways. It functions as a key regulatory gene in APOL1-associated nephropathies and demonstrates correlation with inflammatory signaling and mitochondrial gene regulation in focal segmental glomerulosclerosis 45. Genetic variants affecting NKIRAS1 expression are linked to chr3 kidney disease risk through inflammation-associated pathways 6. Additionally, NKIRAS1 methylation patterns contribute to post-infectious respiratory morbidity phenotypes following RSV infection 7.

Sources cited
1
NKIRAS1 acts as tumor suppressor; reduced expression associated with worse prognosis in multiple cancer types without oncogenic RAS mutations
PMID: 37931099
2
NKIRAS1 expression downregulated in 75% of RCC samples; hemizygous deletions in 64% of clear cell RCC; higher-grade tumors show lower expression
PMID: 20693965
3
NKIRAS1 is strongest hub gene in glomerular transcriptome of APOL1-associated kidney disease
PMID: 35738828
4
NKIRAS1 is most significant hub gene showing differential correlations with mitochondrial and immune-related genes in APOL1-associated FSGS
PMID: 34929253
5
NKIRAS1 expression variants associated with chronic kidney disease risk through inflammation-related signaling pathways
PMID: 37110199
6
NKIRAS1 upregulation in lung tumors associated with loss of methylation and methylation of regulatory microRNAs
PMID: 25869366
7
NKIRAS1 is target gene regulated by miRNA methylation status in lung cancer pathogenesis
PMID: 23156677
8
NKIRAS1 methylation status contributes to diagnostic epigenetic signature for post-RSV respiratory sequelae
PMID: 35619695
Disease Associationsⓘ20
Blackfan-Diamond anemiaOpen Targets
0.52Moderate
hypertrophic cardiomyopathyOpen Targets
0.30Weak
intelligenceOpen Targets
0.26Weak
mathematical abilityOpen Targets
0.16Weak
smoking initiationOpen Targets
0.12Weak
temporomandibular joint disorderOpen Targets
0.12Weak
liver diseaseOpen Targets
0.11Weak
schizophreniaOpen Targets
0.11Weak
polycystic ovary syndromeOpen Targets
0.09Suggestive
refractive errorOpen Targets
0.09Suggestive
HypermetropiaOpen Targets
0.08Suggestive
neoplasmOpen Targets
0.08Suggestive
preeclampsiaOpen Targets
0.08Suggestive
cancerOpen Targets
0.08Suggestive
Abnormality of refractionOpen Targets
0.07Suggestive
attention deficit hyperactivity disorderOpen Targets
0.06Suggestive
autism spectrum disorderOpen Targets
0.06Suggestive
uterine fibroidOpen Targets
0.06Suggestive
allergic asthmaOpen Targets
0.06Suggestive
Uterine leiomyomaOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
NKIRAS2Shared pathway100%CARD19Shared pathway100%NFKBIBProtein interaction74%NLRX1Shared pathway50%C15orf39Shared pathway50%TSPAN6Shared pathway33%
Tissue Expression6 tissues
Brain
100%
Heart
67%
Liver
38%
Ovary
26%
Lung
17%
Bone Marrow
12%
Gene Interaction Network
Click a node to explore
NKIRAS1NKIRAS2CARD19NFKBIBNLRX1C15orf39TSPAN6
PROTEIN STRUCTURE
Preparing viewer…
PDB9QU1 · 2.72 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.13LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.72 [0.48–1.13]
RankingsWhere NKIRAS1 stands among ~20K protein-coding genes
  • #13,469of 20,598
    Most Researched23
  • #11,663of 17,882
    Most Constrained (LOEUF)1.13
Genes detectedNKIRAS1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
A pan-cancer analysis implicates human
PMID: 37931099
Proc Natl Acad Sci U S A · 2023
1.00
2
Genetic and epigenetic changes of NKIRAS1 gene in human renal cell carcinomas.
PMID: 20693965
Exp Oncol · 2010
0.90
3
Impact of APOL1 kidney risk variants on glomerular transcriptomes.
PMID: 35738828
Kidney Int · 2022
0.80
4
Identification of Genetic Markers Linked to The Activity of Indoleamine 2,3-Dioxygenase and Kidney Function.
PMID: 37110199
Metabolites · 2023
0.70
5
[Methylation of some miRNA genes is involved in the regulation of their target genes RAR-beta2 and NKIRAS1 expression in lung cancer].
PMID: 23156677
Mol Biol (Mosk) · 2012
0.60