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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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NUBP2
NUBP iron-sulfur cluster assembly factor 2, cytosolic
Chromosome 16 · 16p13.3
NCBI Gene: 10101Ensembl: ENSG00000095906.17HGNC: HGNC:8042UniProt: B7Z6P0
76PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingcytosoliron-sulfur cluster bindingiron-sulfur cluster assemblymetabolic syndromecolorectal carcinomatibia, hypoplasia or aplasia of, with polydactylyAbsent tibia - polydactyly
✦AI Summary

NUBP2 is a component of the cytosolic iron-sulfur (Fe/S) protein assembly machinery essential for extramitochondrial Fe/S cluster biogenesis 1. The protein forms a heterotetramer with NUBP1 to create a Fe/S scaffold complex that mediates de novo assembly of Fe/S clusters and their transfer to target apoproteins 2. NUBP2 belongs to a conserved nucleotide-binding protein family containing ATP/GTP-binding motifs and shares distinctive NUBP/MRP sequence motifs with prokaryotic counterparts 2. The protein exhibits cytosolic and nuclear localization patterns dependent on N-terminal modifications 3. NUBP2 plays critical developmental roles, as demonstrated by mouse studies showing that neural crest-specific deletion causes severe craniofacial defects and increased apoptosis, leading to prenatal lethality 4. In cancer contexts, NUBP2 shows altered expression patterns associated with poor prognosis in hepatocellular carcinoma 5 and promotes tumor progression in colorectal cancer through GSK3β signaling modulation 6. The protein can be targeted by metal-based therapeutics that disrupt Fe/S cluster biogenesis at sub-cytotoxic concentrations 1. Additionally, alternative splicing of NUBP2 is regulated by metformin treatment, contributing to anti-cancer effects 7.

Sources cited
1
NUBP2 is a component of cytosolic Fe/S protein assembly machinery and can be targeted by rhenium compounds
PMID: 36004624
2
NUBP2 forms heterotetramer with NUBP1 for Fe/S scaffold complex and belongs to conserved nucleotide-binding protein family
PMID: 10486206
3
NUBP2 shows cytosolic and nuclear localization dependent on N-terminal modifications
PMID: 19263241
4
Neural crest-specific NUBP2 deletion causes craniofacial defects and increased apoptosis in mice
PMID: 31733190
5
NUBP2 expression is associated with poor prognosis in hepatocellular carcinoma
PMID: 36313717
6
NUBP2 promotes colorectal cancer progression through GSK3β signaling
PMID: 38492158
7
NUBP2 alternative splicing is regulated by metformin treatment
PMID: 36509195
Disease Associationsⓘ20
colorectal carcinomaOpen Targets
0.07Suggestive
metabolic syndromeOpen Targets
0.07Suggestive
Absent tibia - polydactylyOpen Targets
0.05Suggestive
tibia, hypoplasia or aplasia of, with polydactylyOpen Targets
0.05Suggestive
AcheiropodiaOpen Targets
0.05Suggestive
neoplasmOpen Targets
0.05Suggestive
Acromesomelic dysplasia, Grebe typeOpen Targets
0.05Suggestive
Tibial aplasia - ectrodactylyOpen Targets
0.05Suggestive
Abnormality of the skeletal systemOpen Targets
0.04Suggestive
Hypoplastic tibiae - postaxial polydactylyOpen Targets
0.04Suggestive
Blount diseaseOpen Targets
0.04Suggestive
X-linked retinal dysplasiaOpen Targets
0.04Suggestive
Orofaciodigital syndrome type 2Open Targets
0.04Suggestive
acheiropodyOpen Targets
0.04Suggestive
atrial fibrillationOpen Targets
0.04Suggestive
Leri-Weill dyschondrosteosisOpen Targets
0.04Suggestive
Léri-Weill dyschondrosteosisOpen Targets
0.04Suggestive
acromesomelic dysplasia 2AOpen Targets
0.04Suggestive
acromesomelic dysplasia 2C, Hunter-Thompson typeOpen Targets
0.04Suggestive
Acromesomelic dysplasia, Hunter-Thomson typeOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
ABCB7Protein interaction90%CIAO3Protein interaction90%ACO1Protein interaction87%NSFL1CProtein interaction83%MMS19Protein interaction81%FOXRED1Protein interaction80%
Tissue Expression6 tissues
Liver
100%
Ovary
64%
Lung
54%
Brain
40%
Bone Marrow
29%
Heart
25%
Gene Interaction Network
Click a node to explore
NUBP2ABCB7CIAO3ACO1NSFL1CMMS19FOXRED1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9Y5Y2
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.46LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.03 [0.74–1.46]
RankingsWhere NUBP2 stands among ~20K protein-coding genes
  • #6,269of 20,598
    Most Researched76
  • #14,908of 17,882
    Most Constrained (LOEUF)1.46
Genes detectedNUBP2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
The expression of cuproptosis-related genes in hepatocellular carcinoma and their relationships with prognosis.
PMID: 36313717
Front Oncol · 2022
1.00
2
Two novel mouse genes--Nubp2, mapped to the t-complex on chromosome 17, and Nubp1, mapped to chromosome 16--establish a new gene family of nucleotide-binding proteins in eukaryotes.
PMID: 10486206
Genomics · 1999
0.90
3
An Anticancer Rhenium Tricarbonyl Targets Fe-S Cluster Biogenesis in Ovarian Cancer Cells.
PMID: 36004624
Angew Chem Int Ed Engl · 2022
0.80
4
Metformin inhibits oral squamous cell carcinoma progression through regulating RNA alternative splicing.
PMID: 36509195
Life Sci · 2023
0.70
5
Nubp2 is required for cranial neural crest survival in the mouse.
PMID: 31733190
Dev Biol · 2020
0.60