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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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NUCKS1
nuclear casein kinase and cyclin dependent kinase substrate 1
Chromosome 1 · 1q32.1
NCBI Gene: 64710Ensembl: ENSG00000069275.14HGNC: HGNC:29923UniProt: Q9H1E3
123PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
DNA RepairHighly ConstrainedHomologous Recombination
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
chromatin bindingdouble-stranded DNA bindinghost-mediated activation of viral genome replicationregulation of DNA strand elongationatrial fibrillationParkinson diseaseobesitymorbid obesity
✦AI Summary

NUCKS1 (nuclear casein kinase and cyclin-dependent kinase substrate 1) is a highly conserved 27 kDa chr1-associated protein with multiple cellular functions. Primarily, NUCKS1 promotes homologous recombination-mediated DNA repair by binding double-stranded DNA and secondary DNA structures, though with less affinity than RAD51AP1 1. Beyond DNA repair, NUCKS1 functions as a transcriptional regulator involved in chr1 remodeling and gene expression control 2. Mechanistically, NUCKS1 contains consensus phosphorylation sites for casein kinase II and cyclin-dependent kinases, and shares structural similarity with high mobility group proteins 2. In aging contexts, SIRT7-mediated loss promotes NUCKS1 acetylation and chr1 recruitment, activating inflammatory and metabolic genes through interaction with RELA and CEBPβ transcription factors 3. In cancer cells, NUCKS1 promotes tumorigenesis through distinct pathways: osteosarcoma progression via asparagine synthesis elevation 4, and colorectal cancer metastasis by stabilizing HDAC2 and activating AKT signaling 5. Clinically, NUCKS1 demonstrates significant disease relevance. Genetic variants (rs823093) associate with Parkinson's disease susceptibility through enhancer-mediated activation at the PARK16 locus 6 7. Mendelian randomization studies identify NUCKS1 as a causal gene for sarcopenia, where enhanced expression promotes muscle mass and function 8. Elevated NUCKS1 expression correlates with poor prognosis in multiple cancers and serves as a potential therapeutic target.

Sources cited
1
NUCKS1 promotes homologous recombination DNA repair by binding dsDNA and DNA secondary structures
PMID: 26323318
2
NUCKS1 is a 27 kDa conserved protein with phosphorylation sites for CK2 and Cdk, functioning in DNA damage response and transcriptional regulation
PMID: 29619377
3
SIRT7 loss during senescence promotes NUCKS1 acetylation and chromatin binding to induce inflammatory and metabolic genes
PMID: 40513569
4
NUCKS1 promotes osteosarcoma progression and metastasis by upregulating asparagine synthetase and elevating asparagine synthesis
PMID: 37528150
5
NUCKS1 promotes colorectal cancer invasion and metastasis by stabilizing HDAC2 and activating AKT signaling
PMID: 40527876
6
NUCKS1 rs823093 polymorphism associates with Parkinson's disease susceptibility as a potential biomarker
PMID: 31719764
7
NUCKS1-RAB7L1 locus demonstrates enhancer release and retargeting as an overlooked mechanism in Parkinson's disease risk
PMID: 34040254
8
NUCKS1 has causal association with increased muscle mass and function, representing a druggable target for sarcopenia
PMID: 39117060
9
circATP9A promotes NSCLC progression through HuR-mediated upregulation of NUCKS1 and PI3K/AKT/mTOR pathway activation
PMID: 38049814
Disease Associationsⓘ20
atrial fibrillationOpen Targets
0.49Moderate
Parkinson diseaseOpen Targets
0.45Moderate
obesityOpen Targets
0.34Weak
morbid obesityOpen Targets
0.32Weak
hearing lossOpen Targets
0.31Weak
age-related hearing impairmentOpen Targets
0.30Weak
type 2 diabetes mellitusOpen Targets
0.27Weak
diabetes mellitusOpen Targets
0.26Weak
prostate carcinomaOpen Targets
0.22Weak
Abnormality of the skeletal systemOpen Targets
0.19Weak
nephrolithiasisOpen Targets
0.18Weak
substance abuseOpen Targets
0.14Weak
attention deficit hyperactivity disorderOpen Targets
0.14Weak
smoking initiationOpen Targets
0.11Weak
non-small cell lung carcinomaOpen Targets
0.10Suggestive
colorectal carcinomaOpen Targets
0.09Suggestive
overnutritionOpen Targets
0.09Suggestive
osteosarcomaOpen Targets
0.09Suggestive
gastric cancerOpen Targets
0.08Suggestive
experimental autoimmune encephalomyelitisOpen Targets
0.08Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
RAB29Protein interaction93%PM20D1Protein interaction93%SLC41A1Protein interaction92%SLC45A3Protein interaction81%PHAXProtein interaction79%TONSLShared pathway25%
Tissue Expression6 tissues
Brain
100%
Heart
58%
Ovary
32%
Liver
24%
Bone Marrow
22%
Lung
19%
Gene Interaction Network
Click a node to explore
NUCKS1RAB29PM20D1SLC41A1SLC45A3PHAXTONSL
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9H1E3
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.28Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.09 [0.04–0.28]
RankingsWhere NUCKS1 stands among ~20K protein-coding genes
  • #3,832of 20,598
    Most Researched123 · top quartile
  • #1,021of 17,882
    Most Constrained (LOEUF)0.28 · top 10%
Genes detectedNUCKS1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
SIRT7 regulates NUCKS1 chromatin binding to elicit metabolic and inflammatory gene expression in senescence and liver aging.
PMID: 40513569
Mol Cell · 2025
1.00
2
NUCKS1, a LINC00629-upregulated gene, facilitated osteosarcoma progression and metastasis by elevating asparagine synthesis.
PMID: 37528150
Cell Death Dis · 2023
0.90
3
Identifying genetic determinants of sarcopenia-related traits: a Mendelian randomization study of druggable genes.
PMID: 39117060
Metabolism · 2024
0.80
4
NUCKS1 promotes invasion and metastasis of colorectal cancer by stabilizing HDAC2 and activating AKT.
PMID: 40527876
Oncogenesis · 2025
0.70
5
Functional association between NUCKS1 gene and Parkinson disease: A potential susceptibility biomarker.
PMID: 31719764
Bioinformation · 2019
0.60