HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
OLFM3
olfactomedin 3
Chromosome 1 · 1p21.1
NCBI Gene: 118427Ensembl: ENSG00000118733.18HGNC: HGNC:17990UniProt: B3KTG9
20PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingGO:0005615signal transductionGolgi apparatusplacenta praeviakidney diseasesialolithiasisfood allergy
✦AI Summary

OLFM3 (olfactomedin 3) is a secreted protein that plays diverse roles in neurological disorders and cancer biology. In neurodevelopment and neurological conditions, OLFM3 shows altered expression patterns associated with disease states. In pediatric PTSD, differential DNA methylation of OLFM3 is associated with anterior hippocampal volume abnormalities 1. The gene is also identified as part of a mitochondrial signature in Alzheimer's disease, where it emerges as a potential biomarker in cortex and serum analyses 2. A novel Parkinson's disease locus near OLFM3 on chromosome 1 has been identified through stratified genome-wide association studies 3. In autism spectrum disorders, OLFM3 is closely related to ZIC transcription factors in cerebellar pathology and shows good diagnostic accuracy 4. Beyond neurological contexts, OLFM3 demonstrates oncological significance by contributing to anoikis resistance in lung cancer cells, where high expression correlates with increased cell survival in suspension culture, and siRNA knockdown increases apoptosis 5. The protein is also incorporated into prognostic models for esophageal cancer as a high-risk anoikis-related gene 6. Additionally, OLFM3 genetic variants show suggestive association with pregnancy-related linea nigra, a pigmentation phenotype 7.

Sources cited
1
OLFM3 methylation differences are associated with pediatric PTSD and anterior hippocampal volume
PMID: 33964519
2
OLFM3 is part of an AD-correlated protein panel in cortex and serum
PMID: 32711556
3
A novel Parkinson's disease locus is flanked by OLFM3 on chromosome 1p21
PMID: 24511991
4
OLFM3 is closely related to ZIC genes in ASD cerebellum with good diagnostic accuracy
PMID: 38410689
5
OLFM3 contributes to anoikis resistance in lung cancer cells
PMID: 22281030
6
OLFM3 is identified as a high-risk anoikis-related gene in esophageal cancer prognosis
PMID: 40746552
7
OLFM3 variants show suggestive association with pregnancy-related linea nigra
PMID: 41185931
Disease Associationsⓘ20
placenta praeviaOpen Targets
0.35Weak
kidney diseaseOpen Targets
0.31Weak
sialolithiasisOpen Targets
0.29Weak
food allergyOpen Targets
0.29Weak
response to antihypertensive drugOpen Targets
0.29Weak
alcohol drinkingOpen Targets
0.28Weak
benign soft tissue neoplasmOpen Targets
0.28Weak
kidney transplantOpen Targets
0.27Weak
preeclampsiaOpen Targets
0.21Weak
metabolic diseaseOpen Targets
0.20Weak
Meniere diseaseOpen Targets
0.20Weak
septic shockOpen Targets
0.19Weak
Abnormality of the cardiovascular systemOpen Targets
0.18Weak
frozen shoulderOpen Targets
0.18Weak
amyotrophic lateral sclerosisOpen Targets
0.17Weak
celiac diseaseOpen Targets
0.17Weak
high-risk pregnancyOpen Targets
0.17Weak
placental retentionOpen Targets
0.17Weak
skull disorderOpen Targets
0.17Weak
Abnormality of the gastrointestinal tractOpen Targets
0.17Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
DZANK1Shared pathway100%POC5Shared pathway100%MYOCProtein interaction96%FLOT1Protein interaction96%GRIA1Protein interaction74%RDH13Shared pathway25%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
1%
Heart
0%
Ovary
0%
Liver
0%
Lung
0%
Gene Interaction Network
Click a node to explore
OLFM3DZANK1POC5MYOCFLOT1GRIA1RDH13
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q6IMJ0
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.59Moderately Constrained
pLIⓘ
0.35Tolerant
Observed/Expected LoF0.41 [0.28–0.59]
RankingsWhere OLFM3 stands among ~20K protein-coding genes
  • #14,211of 20,598
    Most Researched20
  • #3,996of 17,882
    Most Constrained (LOEUF)0.59 · top quartile
Genes detectedOLFM3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Integrated analysis of ultra-deep proteomes in cortex, cerebrospinal fluid and serum reveals a mitochondrial signature in Alzheimer's disease.
PMID: 32711556
Mol Neurodegener · 2020
1.00
2
Differential DNA Methylation Is Associated With Hippocampal Abnormalities in Pediatric Posttraumatic Stress Disorder.
PMID: 33964519
Biol Psychiatry Cogn Neurosci Neuroimaging · 2021
0.90
3
Identification of a novel Parkinson's disease locus via stratified genome-wide association study.
PMID: 24511991
BMC Genomics · 2014
0.80
4
Olfactomedin III expression contributes to anoikis-resistance in clonal variants of a human lung squamous carcinoma cell line.
PMID: 22281030
Exp Cell Res · 2012
0.70
5
Identification and Analysis of ZIC-Related Genes in Cerebellum of Autism Spectrum Disorders.
PMID: 38410689
Neuropsychiatr Dis Treat · 2024
0.60