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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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OTOF
otoferlin
Chromosome 2 · 2p23.3
NCBI Gene: 9381Ensembl: ENSG00000115155.19HGNC: HGNC:8515UniProt: Q9HC10
80PubMed Papers
22Diseases
0Drugs
353Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
trans-Golgi networkregulation of neurotransmitter secretioncalcium ion bindingsynaptic vesicle membraneautosomal recessive nonsyndromic hearing loss 9hearing loss, autosomal recessivedeafnessautosomal dominant nonsyndromic hearing loss
✦AI Summary

OTOF encodes otoferlin, a calcium-sensing protein essential for synaptic vesicle exocytosis and neurotransmitter release at cochlear hair cell ribbon synapses 1. The protein functions as a key calcium ion sensor that triggers Ca²⁺-dependent synaptic vesicle-plasma membrane fusion in inner hair cells, enabling sound transduction 2. Mutations in OTOF cause autosomal recessive deafness 9 (DFNB9), characterized by congenital or prelingual severe-to-complete bilateral hearing loss 23. This form of auditory neuropathy represents one of the most common types of genetic hearing loss 4. Recent clinical breakthroughs demonstrate that AAV-mediated OTOF gene therapy can successfully restore hearing in DFNB9 patients, with some achieving near-normal hearing thresholds and speech recognition capabilities 123. In clinical trials, 75% of treated children achieved clinically significant hearing improvement, with some reaching normal hearing sensitivity 3. The therapy shows excellent safety profiles in both preclinical studies and human trials 54. OTOF gene therapy represents a paradigmatic success for genetic hearing loss treatment and serves as a translational model for other forms of hereditary deafness 6.

Sources cited
1
OTOF encodes a calcium-sensing protein for synaptic vesicle exocytosis and successful AAV gene therapy restoration of hearing in DFNB9 patients
PMID: 38189623
2
OTOF functions as calcium ion sensor for vesicle fusion and causes DFNB9 deafness; AAV1-hOTOF therapy shows safety and efficacy
PMID: 38280389
3
DFNB9 causes congenital deafness; DB-OTO gene therapy achieved 75% success rate with some patients reaching normal hearing
PMID: 41085057
4
OTOF mutations cause DFNB9 auditory neuropathy; AAV1-hOTOF shows good safety and efficacy in animal models
PMID: 38027066
5
Preclinical studies demonstrate safety and efficacy of AAV-OTOF gene therapy in mouse and nonhuman primate models
PMID: 38014592
6
OTOF gene therapy serves as translational paradigm for genetic deafness treatment and can almost completely cure DFNB9 patients
PMID: 39556694
Disease Associationsⓘ22
autosomal recessive nonsyndromic hearing loss 9Open Targets
0.82Strong
hearing loss, autosomal recessiveOpen Targets
0.80Strong
deafnessOpen Targets
0.74Strong
autosomal dominant nonsyndromic hearing lossOpen Targets
0.59Moderate
nonsyndromic genetic hearing lossOpen Targets
0.57Moderate
auditory neuropathyOpen Targets
0.56Moderate
Rare genetic deafnessOpen Targets
0.54Moderate
Sensorineural hearing impairmentOpen Targets
0.54Moderate
Hearing impairmentOpen Targets
0.47Moderate
tricho-oculo-dermo-vertebral syndromeOpen Targets
0.45Moderate
genetic disorderOpen Targets
0.42Moderate
Abnormality of the earOpen Targets
0.41Moderate
ear malformationOpen Targets
0.41Moderate
hearing lossOpen Targets
0.38Weak
neurodegenerative diseaseOpen Targets
0.35Weak
connective tissue diseaseOpen Targets
0.27Weak
Pendred syndromeOpen Targets
0.12Weak
Non-syndromic genetic deafnessOpen Targets
0.05Suggestive
HIV-1 infectionOpen Targets
0.05Suggestive
benign adult familial myoclonic epilepsyOpen Targets
0.05Suggestive
Auditory neuropathy, autosomal recessive, 1UniProt
Deafness, autosomal recessive, 9UniProt
Pathogenic Variants353
NM_194248.3(OTOF):c.5193-1G>ALikely pathogenic
Rare genetic deafness|Autosomal recessive nonsyndromic hearing loss 9|not provided|Nonsyndromic genetic hearing loss
★★★☆2024
NM_194248.3(OTOF):c.5098G>C (p.Glu1700Gln)Pathogenic
Autosomal recessive nonsyndromic hearing loss 9|not specified|not provided|Nonsyndromic genetic hearing loss|Rare genetic deafness|Auditory neuropathy spectrum disorder
★★★☆2024→ Residue 1700
NM_194248.3(OTOF):c.5374C>T (p.Arg1792Cys)Likely pathogenic
not specified|not provided|Nonsyndromic genetic hearing loss
★★★☆2023→ Residue 1792
NM_194248.3(OTOF):c.4748G>A (p.Arg1583His)Likely pathogenic
Autosomal recessive nonsyndromic hearing loss 9|not provided|Nonsyndromic genetic hearing loss
★★★☆2022→ Residue 1583
NM_194248.3(OTOF):c.2215-1G>CLikely pathogenic
Autosomal recessive nonsyndromic hearing loss 9|not provided
★★★☆2022
NM_194248.3(OTOF):c.2485C>T (p.Gln829Ter)Pathogenic
Autosomal recessive nonsyndromic hearing loss 9|Rare genetic deafness|not provided|Nonsyndromic genetic hearing loss|OTOF-related disorder
★★★☆2022→ Residue 829
NM_194248.3(OTOF):c.2122C>T (p.Arg708Ter)Pathogenic
Autosomal recessive nonsyndromic hearing loss 9|Rare genetic deafness|not provided|Hearing loss, autosomal recessive|Nonsyndromic genetic hearing loss|OTOF-related disorder
★★★☆2021→ Residue 708
NM_194248.3(OTOF):c.1544T>C (p.Ile515Thr)Likely pathogenic
Auditory neuropathy, autosomal recessive, 1|Autosomal recessive nonsyndromic hearing loss 9|Rare genetic deafness|not provided
★★☆☆2026→ Residue 515
NM_194248.3(OTOF):c.149G>A (p.Trp50Ter)Pathogenic
Autosomal recessive nonsyndromic hearing loss 9|not provided|Nonsyndromic genetic hearing loss
★★☆☆2026→ Residue 50
NM_194248.3(OTOF):c.4718T>C (p.Ile1573Thr)Pathogenic
Autosomal recessive nonsyndromic hearing loss 9|Rare genetic deafness|Bilateral sensorineural hearing impairment|Nonsyndromic genetic hearing loss|not provided|OTOF-related disorder
★★☆☆2026→ Residue 1573
NM_194248.3(OTOF):c.2153G>A (p.Trp718Ter)Pathogenic
Rare genetic deafness|Autosomal recessive nonsyndromic hearing loss 9|Bilateral sensorineural hearing impairment|not provided|OTOF-related disorder
★★☆☆2026→ Residue 718
NM_194248.3(OTOF):c.5566C>T (p.Arg1856Trp)Pathogenic
not specified|not provided|Autosomal recessive nonsyndromic hearing loss 9|OTOF-related disorder
★★☆☆2025→ Residue 1856
NM_194248.3(OTOF):c.5713-2A>GLikely pathogenic
Rare genetic deafness|not provided
★★☆☆2025
NM_194248.3(OTOF):c.1621G>A (p.Gly541Ser)Pathogenic
Autosomal recessive nonsyndromic hearing loss 9|Nonsyndromic genetic hearing loss|not provided
★★☆☆2025→ Residue 541
NM_194248.3(OTOF):c.1981dup (p.Asp661fs)Pathogenic
Ear malformation|not provided
★★☆☆2025→ Residue 661
NM_194248.3(OTOF):c.2887C>T (p.Arg963Ter)Pathogenic
Autosomal recessive nonsyndromic hearing loss 9|not provided
★★☆☆2025→ Residue 963
NM_194248.3(OTOF):c.839del (p.Gly280fs)Pathogenic
Rare genetic deafness|not provided
★★☆☆2025→ Residue 280
NM_194248.3(OTOF):c.3400C>T (p.Arg1134Ter)Pathogenic
Autosomal recessive nonsyndromic hearing loss 9|Bilateral sensorineural hearing impairment|not provided|Monogenic hearing loss
★★☆☆2025→ Residue 1134
NM_194248.3(OTOF):c.3864+1G>APathogenic
Rare genetic deafness|not provided|Sarcoma
★★☆☆2025
NM_194248.3(OTOF):c.709C>T (p.Arg237Ter)Pathogenic
Autosomal recessive nonsyndromic hearing loss 9|not provided
★★☆☆2025→ Residue 237
View on ClinVar ↗
Related Genes
PCDH15Protein interaction100%VAMP2Protein interaction98%DNAJC5Protein interaction93%CTBP2Protein interaction93%SNAP25Protein interaction93%MYO6Protein interaction92%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
72%
Lung
21%
Ovary
18%
Liver
13%
Heart
0%
Gene Interaction Network
Click a node to explore
OTOFPCDH15VAMP2DNAJC5CTBP2SNAP25MYO6
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9HC10
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.02LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.91 [0.81–1.02]
RankingsWhere OTOF stands among ~20K protein-coding genes
  • #5,948of 20,598
    Most Researched80
  • #163of 5,498
    Most Pathogenic Variants353 · top 5%
  • #9,949of 17,882
    Most Constrained (LOEUF)1.02
Genes detectedOTOF
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
AAV-Mediated Gene Therapy Restores Hearing in Patients with DFNB9 Deafness.
PMID: 38189623
Adv Sci (Weinh) · 2024
1.00
2
AAV1-hOTOF gene therapy for autosomal recessive deafness 9: a single-arm trial.
PMID: 38280389
Lancet · 2024
0.90
3
DB-OTO Gene Therapy for Inherited Deafness.
PMID: 41085057
N Engl J Med · 2026
0.80
4
The rise of cochlear gene therapy.
PMID: 39520052
Mol Ther · 2025
0.70
5
Preclinical Efficacy And Safety Evaluation of AAV-OTOF in DFNB9 Mouse Model And Nonhuman Primate.
PMID: 38014592
Adv Sci (Weinh) · 2024
0.60