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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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PAX4
paired box 4
Chromosome 7 · 7q32.1
NCBI Gene: 5078Ensembl: ENSG00000106331.19HGNC: HGNC:8618UniProt: A0A1W2PPX4
76PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
negative regulation of enteroendocrine cell differentiationsequence-specific double-stranded DNA bindingDNA-binding transcription repressor activity, RNA polymerase II-specificintestinal enterochromaffin enteroendocrine cell differentiationtype 2 diabetes mellitusdiabetic ketoacidosisMODYmaturity-onset diabetes of the young type 9
✦AI Summary

PAX4 is a paired box transcription factor essential for pancreatic β-cell development and function. As a DNA-binding transcription factor with repressor activity 1, PAX4 regulates cell-fate commitment in early endocrine progenitors toward the insulin-secreting β-cell lineage 1. PAX4 also controls enterochromaffin cell differentiation in intestinal tissue by repressing endocrine lineage commitment 2. In embryonic development, Pax4 knockout eliminates β cells while increasing glucagon-producing α cells, typically causing neonatal lethality 1. In adults, PAX4 expression is restricted to proliferative β-cell subsets; upregulation promotes β-cell survival and proliferation 1. Clinically, PAX4 mutations associate with type 2 diabetes and MODY9 3. Loss-of-function variants, including p.His192 and p.Tyr186X, impair insulin secretion and increase polyhormonal cell formation in human islets 4. However, PAX4 was statistically inconsistent with high-penetrance MODY inheritance in large population studies 5. Therapeutically, PAX4 represents a promising target: gene delivery into type 2 diabetic human islets significantly improved β-cell survival, composition, and glucose-stimulated insulin secretion 6. Ectopic PAX4 expression in α or δ cells generates functional β-like cells, potentially improving glucose regulation 1.

Sources cited
1
PAX4 is a transcription factor essential for β-cell lineage commitment, embryonic pancreatic islet development, and its upregulation promotes β-cell survival and proliferation
PMID: 37175989
2
PAX4 is a central endocrine transcription factor controlled by ZNF800 that regulates enterochromaffin cell differentiation
PMID: 37883554
3
PAX4 loss-of-function variants impair insulin secretion and β-cell development in human islet models, contributing to type 2 diabetes risk
PMID: 37777536
4
PAX4 gene delivery to type 2 diabetic human islets improves β-cell survival, composition, and insulin secretion
PMID: 39118533
5
PAX4 mutations cause MODY9, a monogenic form of diabetes
PMID: 36595822
6
PAX4 failed statistical criteria for high-penetrance MODY gene classification in a large population-based study
PMID: 36208030
Disease Associationsⓘ20
type 2 diabetes mellitusOpen Targets
0.68Moderate
diabetic ketoacidosisOpen Targets
0.56Moderate
MODYOpen Targets
0.52Moderate
maturity-onset diabetes of the young type 9Open Targets
0.41Moderate
diabetes mellitusOpen Targets
0.35Weak
liver diseaseOpen Targets
0.33Weak
diabetic eye diseaseOpen Targets
0.32Weak
diabetic retinopathyOpen Targets
0.32Weak
cleft palateOpen Targets
0.29Weak
uterine fibroidOpen Targets
0.29Weak
maturity-onset diabetes of the youngOpen Targets
0.19Weak
duodenal ulcerOpen Targets
0.19Weak
monogenic diabetesOpen Targets
0.16Weak
HyperglycemiaOpen Targets
0.13Weak
AnxietyOpen Targets
0.11Weak
gestational diabetesOpen Targets
0.10Weak
risk-taking behaviourOpen Targets
0.10Suggestive
SnoringOpen Targets
0.10Suggestive
Barrett's esophagusOpen Targets
0.07Suggestive
gastric cancerOpen Targets
0.07Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
RFX6Protein interaction90%NEUROG3Protein interaction90%GCGProtein interaction89%SLC2A2Protein interaction85%ISL1Protein interaction84%NEUROD1Protein interaction84%
Tissue Expression6 tissues
Brain
100%
Heart
0%
Lung
0%
Bone Marrow
0%
Ovary
0%
Liver
0%
Gene Interaction Network
Click a node to explore
PAX4RFX6NEUROG3GCGSLC2A2ISL1NEUROD1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt J3KPG0
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.06LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.79 [0.60–1.06]
RankingsWhere PAX4 stands among ~20K protein-coding genes
  • #6,273of 20,598
    Most Researched76
  • #10,592of 17,882
    Most Constrained (LOEUF)1.06
Genes detectedPAX4
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Unbiased transcription factor CRISPR screen identifies ZNF800 as master repressor of enteroendocrine differentiation.
PMID: 37883554
Science · 2023
1.00
2
Pax4 in Health and Diabetes.
PMID: 37175989
Int J Mol Sci · 2023
0.90
3
Statistical evidence for high-penetrance MODY-causing genes in a large population-based cohort.
PMID: 36208030
Endocrinol Diabetes Metab · 2022
0.80
4
Pharmacogenomics of glinides.
PMID: 25560470
Pharmacogenomics · 2015
0.70
5
PAX4 loss of function increases diabetes risk by altering human pancreatic endocrine cell development.
PMID: 37777536
Nat Commun · 2023
0.60