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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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PDE12
phosphodiesterase 12
Chromosome 3 · 3p14.3
NCBI Gene: 201626Ensembl: ENSG00000174840.10HGNC: HGNC:25386UniProt: A0ABB0MV04
75PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
mitochondrionmitochondrial matrixexonuclease activitypoly(A)-specific ribonuclease activityneurodegenerative diseaseatrial fibrillationtype 1 diabetes mellitusdiabetes mellitus
✦AI Summary

PDE12 is a poly(A)-specific exoribonuclease with dual roles in antiviral immunity and mitochondrial RNA processing. Primary function: PDE12 cleaves both 2',5'- and 3',5'-phosphodiester bonds in oligoadenylates 12, serving as a negative regulator of the interferon-induced 2-5A system 3. Mechanism: PDE12 degrades 2',5'-oligoadenylate units, reducing RNAseL activation and decreasing antiviral responses 3. In mitochondria, PDE12 removes poly(A) tails from mitochondrial mRNAs, regulating translation efficiency and steady-state transcript levels 2. Disease relevance: PDE12 inhibition enhances antiviral activity against multiple RNA viruses including SARS-CoV-2, HCV, dengue, and West Nile virus 3. Conversely, pathogenic PDE12 variants cause neonatal mitochondrial disease with respiratory chain deficiencies, lactic acidosis, and neurological/muscular phenotypes due to impaired mitochondrial RNA processing 45. Clinical significance: Decreased PDE12 expression associates with recently diagnosed type 1 diabetes 6, and PDE12 promotes gastric cancer progression via TCAF2/JAK2/STAT3 axis activation 7. PDE12 inhibitors show therapeutic potential as pan-RNA virus antivirals 3.

Sources cited
1
PDE12 cleaves 2',5'- and 3',5'-phosphodiester bonds in oligoadenylates; suppression increases 2-5A levels and decreases viral replication
PMID: 26055709
2
PDE12 removes poly(A) tails from mitochondrial mRNAs and regulates mitochondrial protein synthesis
PMID: 21666256
3
PDE12 inhibition enhances antiviral activity against EMCV, HCV, DENV, WNV, and SARS-CoV-2 through RNAseL amplification
PMID: 37432877
4
Pathogenic PDE12 variants cause neonatal mitochondrial disease with respiratory chain deficiency and lactic acidosis
PMID: 39567835
5
PDE12-mediated removal of poly(A) tails from mitochondrial tRNAs is essential for survival
PMID: 39567836
6
Decreased PDE12 expression associates with recently diagnosed type 1 diabetes
PMID: 36307540
7
PDE12 promotes gastric cancer progression via TCAF2/JAK2/STAT3 axis activation
PMID: 40628363
8
PDE12 is a deadenylase with conserved catalytic residues and structure similar to other deadenylases
PMID: 30389976
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.46Moderate
atrial fibrillationOpen Targets
0.04Suggestive
type 1 diabetes mellitusOpen Targets
0.04Suggestive
diabetes mellitusOpen Targets
0.04Suggestive
type 2 diabetes mellitusOpen Targets
0.04Suggestive
gastric cancerOpen Targets
0.03Suggestive
AnxietyOpen Targets
0.01Suggestive
ArrhythmiaOpen Targets
0.01Suggestive
mitochondrial diseaseOpen Targets
0.01Suggestive
depressive disorderOpen Targets
0.01Suggestive
myocardial infarctionOpen Targets
0.01Suggestive
osteoarthritisOpen Targets
0.01Suggestive
Nager acrofacial dysostosisOpen Targets
0.01Suggestive
Alzheimer diseaseOpen Targets
0.01Suggestive
neoplasmOpen Targets
0.01Suggestive
hepatocellular carcinomaOpen Targets
0.01Suggestive
colorectal cancerOpen Targets
0.01Suggestive
heart failureOpen Targets
0.01Suggestive
pulmonary hypertensionOpen Targets
0.01Suggestive
brain diseaseOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
RNASELProtein interaction93%FLNAProtein interaction77%CNOT1Protein interaction75%CNOT9Protein interaction74%DDX6Protein interaction74%SLIRPProtein interaction70%
Tissue Expression6 tissues
Bone Marrow
100%
Brain
87%
Liver
73%
Heart
51%
Lung
43%
Ovary
38%
Gene Interaction Network
Click a node to explore
PDE12RNASELFLNACNOT1CNOT9DDX6SLIRP
PROTEIN STRUCTURE
Preparing viewer…
PDB4Z0V · 1.78 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.76LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.55 [0.40–0.76]
RankingsWhere PDE12 stands among ~20K protein-coding genes
  • #6,352of 20,598
    Most Researched75
  • #6,040of 17,882
    Most Constrained (LOEUF)0.76
Genes detectedPDE12
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Elongational stalling activates mitoribosome-associated quality control.
PMID: 33243891
Science · 2020
1.00
2
Inhibition of phosphodiesterase 12 results in antiviral activity against several RNA viruses including SARS-CoV-2.
PMID: 37432877
J Gen Virol · 2023
0.90
3
Pathogenic PDE12 variants impair mitochondrial RNA processing causing neonatal mitochondrial disease.
PMID: 39567835
EMBO Mol Med · 2025
0.80
4
Phosphodiesterase 12 facilitates the growth and metastatic capabilities of gastric cancer cells by activating the TCAF2/JAK2/STAT3 axis.
PMID: 40628363
Biochim Biophys Acta Mol Basis Dis · 2025
0.70
5
PDE12 removes mitochondrial RNA poly(A) tails and controls translation in human mitochondria.
PMID: 21666256
Nucleic Acids Res · 2011
0.60