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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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PDE9A
phosphodiesterase 9A
Chromosome 21 · 21q22.3
NCBI Gene: 5152Ensembl: ENSG00000160191.19HGNC: HGNC:8795UniProt: A0A0S2Z475
49PubMed Papers
20Diseases
6Drugs
0Pathogenic Variants
CLINICAL
FDA Approved Target
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cGMP metabolic processcGMP catabolic processprotein bindingcytosolcoronary artery diseasestrokecardiovascular diseaseAlzheimer disease
✦AI Summary

PDE9A (phosphodiesterase 9A) is a highly specific cGMP-hydrolyzing enzyme that regulates intracellular cyclic nucleotide signaling. The protein exhibits exceptional selectivity for cGMP with a Km of 170 nM, making it one of the highest affinity PDEs known, while showing minimal activity toward cAMP (Km = 230 μM) 1. PDE9A functions through degradation of cGMP, thereby suppressing the cardioprotective cGMP-PKG signaling pathway 2. In cardiac tissue, PDE9A upregulation contributes to pathological remodeling by impairing calcium handling, promoting fibrosis and hypertrophy, and causing contractile dysfunction through diminished SERCA2a function and RyR2 instability 2. The enzyme is regulated by the E3 ubiquitin ligase CHIP, which facilitates PDE9A polyubiquitination and autophagic degradation 3. Clinically, PDE9A shows promise as a therapeutic target across multiple conditions. In metabolic disorders, PDE9A inhibition reduces obesity and cardiometabolic syndrome by stimulating mitochondrial activity and lipolysis in a PPARα-dependent manner 4. In cancer, PDE9A expression is downregulated in colorectal cancer tissues, with higher expression levels correlating with improved patient survival 5. Additionally, genetic studies suggest causal relationships between PDE9A and psychiatric disorders 6.

Sources cited
1
PDE9A has exceptional cGMP selectivity with Km of 170 nM for cGMP and 230 μM for cAMP
PMID: 9624146
2
PDE9A suppresses cGMP-PKG signaling and contributes to cardiac calcium handling dysfunction and pathological remodeling
PMID: 40650137
3
CHIP regulates PDE9A through polyubiquitination and autophagic degradation
PMID: 39806097
4
PDE9A inhibition reduces obesity through PPARα-dependent mitochondrial stimulation and lipolysis
PMID: 34618683
5
PDE9A expression is downregulated in colorectal cancer with higher expression correlating with better survival
PMID: 34016083
6
Genetic evidence suggests causal relationships between PDE9A and psychiatric disorders
PMID: 37605207
Disease Associationsⓘ20
coronary artery diseaseOpen Targets
0.54Moderate
strokeOpen Targets
0.54Moderate
cardiovascular diseaseOpen Targets
0.39Weak
Alzheimer diseaseOpen Targets
0.39Weak
restless legs syndromeOpen Targets
0.39Weak
hypertensionOpen Targets
0.37Weak
intermittent vascular claudicationOpen Targets
0.37Weak
Recurrent thrombophlebitisOpen Targets
0.37Weak
chronic kidney diseaseOpen Targets
0.35Weak
Parkinson diseaseOpen Targets
0.34Weak
Hepatitis, AlcoholicOpen Targets
0.33Weak
Neonatal sepsisOpen Targets
0.32Weak
neurodegenerative diseaseOpen Targets
0.32Weak
lysosomal storage diseaseOpen Targets
0.32Weak
multiple sclerosisOpen Targets
0.32Weak
non-alcoholic steatohepatitisOpen Targets
0.31Weak
osteonecrosisOpen Targets
0.29Weak
COVID-19Open Targets
0.29Weak
necrotizing enterocolitisOpen Targets
0.28Weak
chronic renal failure syndromeOpen Targets
0.27Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Drug Targets6
DIPYRIDAMOLEApproved
3',5'-cyclic phosphodiesterase inhibitor
coronary artery disease
EDELINONTRINEPhase II
Phosphodiesterase 9A inhibitor
Alzheimer disease
IRSENONTRINEPhase II
Phosphodiesterase 9A inhibitor
Lewy body dementia
OSORESNONTRINEPhase II
Phosphodiesterase 9A inhibitor
Alzheimer disease
PENTOXIFYLLINEApproved
Adenosine A2 receptor antagonist
cardiovascular disease
TOVINONTRINEPhase II
Phosphodiesterase 9A inhibitor
Related Genes
GMPSProtein interaction99%ADCY4Protein interaction95%ADCY3Protein interaction91%ADCY6Protein interaction91%APRTProtein interaction91%GMPRProtein interaction91%
Tissue Expression6 tissues
Brain
100%
Heart
84%
Liver
73%
Ovary
56%
Bone Marrow
54%
Lung
50%
Gene Interaction Network
Click a node to explore
PDE9AGMPSADCY4ADCY3ADCY6APRTGMPR
PROTEIN STRUCTURE
Preparing viewer…
PDB4Y86 · 2.01 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.09LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.82 [0.62–1.09]
RankingsWhere PDE9A stands among ~20K protein-coding genes
  • #8,995of 20,598
    Most Researched49
  • #665of 1,025
    FDA-Approved Drug Targets2
  • #11,129of 17,882
    Most Constrained (LOEUF)1.09
Genes detectedPDE9A
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Using Machine Learning Methods to Study Colorectal Cancer Tumor Micro-Environment and Its Biomarkers.
PMID: 37446311
Int J Mol Sci · 2023
1.00
2
Prognostic and clinicopathological insights of phosphodiesterase 9A gene as novel biomarker in human colorectal cancer.
PMID: 34016083
BMC Cancer · 2021
0.90
3
Inhibition of phosphodiesterase type 9 reduces obesity and cardiometabolic syndrome in mice.
PMID: 34618683
J Clin Invest · 2021
0.80
4
Phosphodiesterase and psychiatric disorders: a two-sample Mendelian randomization study.
PMID: 37605207
J Transl Med · 2023
0.70
5
Isolation and characterization of PDE9A, a novel human cGMP-specific phosphodiesterase.
PMID: 9624146
J Biol Chem · 1998
0.60