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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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PDLIM4
PDZ and LIM domain 4
Chromosome 5 · 5q31.1
NCBI Gene: 8572Ensembl: ENSG00000131435.14HGNC: HGNC:16501UniProt: A0A0S2Z4N4
52PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cytoplasmcytosolcytoskeletonactin cytoskeletonneurodegenerative diseasedermatitisinflammatory bowel diseaseEczematoid dermatitis
✦AI Summary

PDLIM4 (PDZ and LIM domain 4) is a cytoskeletal regulatory protein that modulates actin organization and cell migration through its PDZ and LIM domains 1. The protein functions as a molecular scaffold that influences multiple cellular processes, including cell cycle regulation and stress response. PDLIM4 stabilizes p21 protein by blocking its RNA degradation, leading to G2/M cell cycle arrest and reduced cell proliferation in a p53-independent manner 2. In gastric cancer, PDLIM4 promotes malignant progression and cisplatin resistance by competitively inhibiting STUB1-mediated HSP70 ubiquitination, thereby activating MAPK signaling pathways 3. The protein also serves as a target of the circular RNA circ0002360/miR-629-3p regulatory axis, promoting gastric cancer cell proliferation and migration while inhibiting oxidative stress 4. PDLIM4 genetic polymorphisms influence bone metabolism, with specific variants associated with increased osteoporotic fracture risk through effects on bone turnover markers 5. The gene is transcriptionally regulated by BRD4 and produces alternative transcripts, including variants lacking the LIM domain 6. These findings establish PDLIM4 as a multifunctional protein with significant roles in cancer progression, bone metabolism, and cellular homeostasis.

Sources cited
1
PDLIM4 belongs to ALP/Enigma family proteins with PDZ and LIM domains that regulate cytoskeletal dynamics
PMID: 36531944
2
PDLIM4 stabilizes p21 protein and induces G2/M cell cycle arrest independent of p53
PMID: 41546036
3
PDLIM4 promotes gastric cancer progression and cisplatin resistance by inhibiting HSP70 degradation
PMID: 41076533
4
PDLIM4 is regulated by circ0002360/miR-629-3p axis and promotes gastric cancer cell proliferation
PMID: 35982735
5
PDLIM4 genetic polymorphisms are associated with osteoporotic fracture risk and bone turnover
PMID: 30578378
6
RIL/PDLIM4 produces alternative transcripts and is located on chromosome 5q31.1
PMID: 9573374
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.45Moderate
dermatitisOpen Targets
0.39Weak
inflammatory bowel diseaseOpen Targets
0.24Weak
Eczematoid dermatitisOpen Targets
0.20Weak
hypertensionOpen Targets
0.20Weak
goutOpen Targets
0.19Weak
Nasal polyposisOpen Targets
0.14Weak
prurigo nodularisOpen Targets
0.12Weak
allergic rhinitisOpen Targets
0.12Weak
brain aneurysmOpen Targets
0.10Weak
rosaceaOpen Targets
0.10Weak
skin agingOpen Targets
0.09Suggestive
meibomian cystOpen Targets
0.08Suggestive
acneOpen Targets
0.06Suggestive
breast cancerOpen Targets
0.06Suggestive
T2-high asthmaOpen Targets
0.05Suggestive
asthmaOpen Targets
0.04Suggestive
ovarian cancerOpen Targets
0.04Suggestive
Crohn's diseaseOpen Targets
0.03Suggestive
gastric cancerOpen Targets
0.03Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
RAC3Protein interaction91%MYO1AProtein interaction91%MYO1CProtein interaction90%MYO6Protein interaction90%MYO3AProtein interaction90%CD2APProtein interaction90%
Tissue Expression6 tissues
Ovary
100%
Brain
21%
Lung
20%
Heart
17%
Bone Marrow
5%
Liver
3%
Gene Interaction Network
Click a node to explore
PDLIM4RAC3MYO1AMYO1CMYO6MYO3ACD2AP
PROTEIN STRUCTURE
Preparing viewer…
PDB2V1W · 1.90 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.96LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.62 [0.41–0.96]
RankingsWhere PDLIM4 stands among ~20K protein-coding genes
  • #8,597of 20,598
    Most Researched52
  • #8,984of 17,882
    Most Constrained (LOEUF)0.96
Genes detectedPDLIM4
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
PDLIM4 drives gastric cancer malignant progression and cisplatin resistance by inhibiting HSP70 ubiquitination and degradation via competitive interaction with STUB1.
PMID: 41076533
J Nanobiotechnology · 2025
1.00
2
Associations between polymorphisms of the
PMID: 30578378
Biosci Rep · 2019
0.90
3
[Role of PDLIM4 and c-Src in Breast Cancer Progression].
PMID: 27028812
Mol Biol (Mosk) · 2016
0.80
4
Circular RNA hsa_circ_0002360 Promotes Proliferation and Invasion and Inhibits Oxidative Stress in Gastric Cancer by Sponging miR-629-3p and Regulating the PDLIM4 Expression.
PMID: 35982735
Oxid Med Cell Longev · 2022
0.70
5
The unexpected versatility of ALP/Enigma family proteins.
PMID: 36531944
Front Cell Dev Biol · 2022
0.60