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GeneE
1 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
PGCKA1
PDCD10 and GCKIII kinases associated 1
Chromosome 4 Β· 4p14
NCBI Gene: 55286Ensembl: ENSG00000154274.16HGNC: HGNC:25618UniProt: Q8IY42
17PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Tumor Suppressor
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingregulation of cell cyclecell peripheryplasma membranecutaneous melanomamale reproductive organ cancerpreeclampsiaadolescent idiopathic scoliosis
✦AI Summary

Based on limited published evidence, PGCKA1 acts as a tumor suppressor. It suppresses cell proliferation when overexpressed 1 and functions in the PDCD10-GCKIII kinase module. In colorectal cancer, PGCKA1 exerts tumor suppressive activity by targeting the KEAP1/USP17/ELK1/CDK6 axis to inhibit cell proliferation 2. The gene is located on chromosome 4, which shows recurrent deletion in basal breast cancer, suggesting loss of PGCKA1 contributes to enhanced tumor proliferation 1.

Sources cited
1
PGCKA1 (C4orf19) suppresses proliferation when overexpressed; located on chr4p which is recurrently deleted in basal breast cancer
PMID: 38517886
2
PGCKA1 acts as tumor suppressor in colorectal cancer by targeting KEAP1/USP17/ELK1/CDK6 axis
PMID: 36882524
⚠Limited data available β€” This gene has 2 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
cutaneous melanomaOpen Targets
0.33Weak
male reproductive organ cancerOpen Targets
0.31Weak
preeclampsiaOpen Targets
0.31Weak
adolescent idiopathic scoliosisOpen Targets
0.30Weak
neoplasmOpen Targets
0.30Weak
esophageal cancerOpen Targets
0.28Weak
contractureOpen Targets
0.13Weak
cholelithiasisOpen Targets
0.07Suggestive
Hyperlipoproteinemia type 1Open Targets
0.05Suggestive
familial apolipoprotein C-II deficiencyOpen Targets
0.04Suggestive
immunodeficiency 80 with or without congenital cardiomyopathyOpen Targets
0.03Suggestive
goutOpen Targets
0.03Suggestive
chronic obstructive pulmonary diseaseOpen Targets
0.03Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.03Suggestive
familial lipoprotein lipase deficiencyOpen Targets
0.03Suggestive
colorectal cancerOpen Targets
0.02Suggestive
Iron deficiency anemiaOpen Targets
0.02Suggestive
medulloblastomaOpen Targets
0.02Suggestive
cancerOpen Targets
0.02Suggestive
colorectal carcinomaOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
CDK8Shared pathway100%PRCCShared pathway100%CDK20Shared pathway100%HBP1Shared pathway100%CDKL4Shared pathway100%MRFAP1L2Shared pathway100%
Tissue Expression6 tissues
Liver
100%
Bone Marrow
16%
Lung
6%
Brain
5%
Ovary
1%
Heart
1%
Gene Interaction Network
Click a node to explore
PGCKA1CDK8PRCCCDK20HBP1CDKL4MRFAP1L2
PROTEIN STRUCTURE
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AlphaFoldAI-predicted Β· UniProt Q8IY42
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.66LoF Tolerant
pLIβ“˜
0.29Tolerant
Observed/Expected LoF0.43 [0.15–1.66]
RankingsWhere PGCKA1 stands among ~20K protein-coding genes
  • #15,092of 20,598
    Most Researched17
  • #15,944of 17,882
    Most Constrained (LOEUF)1.66
Genes detectedPGCKA1
Sources retrieved1 papers
Response timeβ€”
πŸ“„ Sources
1
1
Evolution of chromosome-arm aberrations in breast cancer through genetic network rewiring.
PMID: 38517886
Cell Rep Β· 2024
1.00