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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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PHF11
PHD finger protein 11
Chromosome 13 · 13q14.2
NCBI Gene: 51131Ensembl: ENSG00000136147.19HGNC: HGNC:17024UniProt: B4DDL5
41PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingnucleoplasmnuclear membranenucleusHallux valgusattention deficit hyperactivity disorderjoint diseaseneoplasm
✦AI Summary

PHF11 (PHD finger protein 11) is a nuclear transcriptional co-activator with pleiotropic functions in immunity and DNA repair. As a positive regulator of Th1-type cytokine gene expression, PHF11 cooperates with NF-κB to enhance transcription of interferon-γ (IFNG) and interleukin-2 (IL2) 1. Beyond cytokine regulation, PHF11 contributes broadly to T-cell activation and viability through multiple mechanisms: it shuttles between cytoplasm and nucleus upon T-cell activation, recruits NF-κB to the IFNG promoter, and regulates expression of genes required for T-cell differentiation and homeostasis 1. Additionally, PHF11 functions as a DNA damage response factor that promotes double-strand break resection, ATR signaling, and homologous recombination repair by stimulating the EXO1 exonuclease and overcoming RPA-mediated inhibition 2. PHF11 polymorphisms are associated with allergic diseases including asthma and eczema in multiple populations 3, 4, though this association shows population-dependent variation 5. Notably, PHF11 also exhibits antiviral activity by selectively inhibiting foamy virus basal transcription from the internal promoter, preventing viral transactivator expression and promoting viral latency 6. In cancer contexts, PHF11 has been identified as a prognostic biomarker for melanoma survival prediction when combined with immune checkpoint markers 7.

Sources cited
1
PHF11 is a transcriptional co-activator of IFNG and IL2 genes cooperating with NF-κB, with roles in T-cell activation, nuclear import, and CD28 expression
PMID: 20421878
2
PHF11 promotes double-strand break resection, ATR signaling, and homologous recombination by stimulating EXO1 and overcoming RPA inhibition
PMID: 28115467
3
PHF11 is implicated in pathogenesis and susceptibility to atopy and asthma
PMID: 15683615
4
PHF11 was identified as a novel asthma susceptibility gene through positional cloning in 2003
PMID: 14764626
5
PHF11 SNPs show weak or no association with asthma and eczema in Chinese children, suggesting population-dependent genetic effects
PMID: 20717939
6
PHF11 inhibits foamy virus replication by blocking basal transcription from the viral internal promoter, preventing Tas expression
PMID: 32678836
7
PHF11 was identified as a prognostic feature in machine learning models for melanoma survival prediction with immunotherapy response
PMID: 39633110
Disease Associationsⓘ20
Hallux valgusOpen Targets
0.29Weak
attention deficit hyperactivity disorderOpen Targets
0.09Suggestive
joint diseaseOpen Targets
0.08Suggestive
neoplasmOpen Targets
0.08Suggestive
attention deficit-hyperactivity disorder 8Open Targets
0.07Suggestive
hereditary attention deficit-hyperactivity disorderOpen Targets
0.07Suggestive
intellectual disability, autosomal recessive 59Open Targets
0.07Suggestive
movement disorderOpen Targets
0.07Suggestive
schizophrenia 15Open Targets
0.07Suggestive
infectionOpen Targets
0.06Suggestive
Phelan-McDermid syndromeOpen Targets
0.05Suggestive
autismOpen Targets
0.05Suggestive
Tourette syndromeOpen Targets
0.05Suggestive
hypertriglyceridemia 2Open Targets
0.05Suggestive
X-linked non-syndromic intellectual disabilityOpen Targets
0.04Suggestive
asthmaOpen Targets
0.04Suggestive
intellectual disability, autosomal dominant 50Open Targets
0.04Suggestive
ulcerative colitisOpen Targets
0.04Suggestive
Potocki-Lupski syndromeOpen Targets
0.04Suggestive
Familial hemophagocytic lymphohistiocytosisOpen Targets
0.04Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SETDB2Protein interaction99%ADAM33Protein interaction91%SPINK5Protein interaction75%NPSR1Protein interaction72%DPP10Protein interaction65%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
94%
Ovary
76%
Liver
73%
Heart
49%
Brain
28%
Gene Interaction Network
Click a node to explore
PHF11SETDB2ADAM33SPINK5NPSR1DPP10
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9UIL8
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.93LoF Tolerant
pLIⓘ
0.05Tolerant
Observed/Expected LoF1.65 [0.48–1.93]
RankingsWhere PHF11 stands among ~20K protein-coding genes
  • #10,051of 20,598
    Most Researched41
  • #17,487of 17,882
    Most Constrained (LOEUF)1.93
Genes detectedPHF11
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Integrated explainable machine learning and multi-omics analysis for survival prediction in cancer with immunotherapy response.
PMID: 39633110
Apoptosis · 2025
1.00
2
Allergic airway inflammation.
PMID: 15683615
Curr Allergy Asthma Rep · 2005
0.90
3
A role for the atopy-associated gene PHF11 in T-cell activation and viability.
PMID: 20421878
Immunol Cell Biol · 2010
0.80
4
Asthma genetics 2003.
PMID: 14764626
Hum Mol Genet · 2004
0.70
5
Polymorphisms of PHF11 and DPP10 are associated with asthma and related traits in a Chinese population.
PMID: 19672052
Respiration · 2010
0.60