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7 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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PHOSPHO2
phosphatase, orphan 2
Chromosome 2 · 2q31.1
NCBI Gene: 493911Ensembl: ENSG00000144362.13HGNC: HGNC:28316UniProt: Q8TCD6
15PubMed Papers
19Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingphosphatase activitypyridoxal phosphatase activityneurodegenerative diseaseheart conduction diseasehepatocellular carcinomaHyperhidrosis
✦AI Summary

PHOSPHO2 is a haloacid dehalogenase superfamily phosphatase with specialized substrate specificity. Its primary function is dephosphorylation of pyridoxal 5'-phosphate (PLP), exhibiting high catalytic activity (Vmax of 633 nmol min⁻¹ mg⁻¹, Km of 45.5 µM) toward this substrate 1. Unlike the structurally similar PHOSPHO1 phosphatase, PHOSPHO2 shows relatively poor activity toward phosphoethanolamine and phosphocholine, with substrate selectivity determined by subtle charge distribution differences in the active site 1. The enzyme contains three conserved catalytic motifs characteristic of the haloacid dehalogenase superfamily, with key aspartate residues essential for catalytic activity 1. Regarding disease relevance, PHOSPHO2 expression is significantly upregulated in hepatocellular carcinoma (HCC) tissues compared to normal liver, and elevated PHOSPHO2 expression correlates with poor overall survival in HCC patients 2 3. PHOSPHO2 was identified as a key prognostic and diagnostic biomarker for liver cancer 2. Functionally, PHOSPHO2 knockdown reduces HCV antiviral-induced HCC cell proliferation and migration 3, suggesting PHOSPHO2 contributes to hepatocarcinogenesis mechanisms. These findings indicate PHOSPHO2 has potential clinical significance as a therapeutic target and prognostic indicator in HCC.

Sources cited
1
PHOSPHO2 substrate specificity, showing high activity toward PLP and poor activity toward phosphoethanolamine and phosphocholine; structural basis of active site differences from PHOSPHO1
PMID: 16054448
2
PHOSPHO2 identified as upregulated key gene in liver cancer tissues, included in prognostic and diagnostic models, associated with poor prognosis
PMID: 40465781
3
PHOSPHO2 upregulation by sofosbuvir in HCC cells; high PHOSPHO2 expression associated with poor HCC patient survival; PHOSPHO2 knockdown reduces HCC cell proliferation and migration
PMID: 35833210
⚠Limited data available — This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ19
neurodegenerative diseaseOpen Targets
0.39Weak
heart conduction diseaseOpen Targets
0.03Suggestive
hepatocellular carcinomaOpen Targets
0.02Suggestive
HyperhidrosisOpen Targets
0.02Suggestive
neoplasmOpen Targets
0.02Suggestive
gastric cancerOpen Targets
0.01Suggestive
liver cancerOpen Targets
0.01Suggestive
Abnormal sperm morphologyOpen Targets
0.01Suggestive
chronic interstitial cystitisOpen Targets
0.01Suggestive
metabolic syndromeOpen Targets
0.00Suggestive
rheumatoid arthritisOpen Targets
0.00Suggestive
infectionOpen Targets
0.00Suggestive
cancerOpen Targets
0.00Suggestive
gastric adenocarcinomaOpen Targets
0.00Suggestive
myelodysplastic syndromeOpen Targets
0.00Suggestive
familial pancreatic carcinomaOpen Targets
0.00Suggestive
lymphomaOpen Targets
0.00Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.00Suggestive
ovarian cancerOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
AOX1Protein interaction92%PDXKProtein interaction90%PNPOProtein interaction90%PDXPProtein interaction90%
Tissue Expression6 tissues
Ovary
100%
Bone Marrow
92%
Brain
73%
Liver
60%
Heart
44%
Lung
42%
Gene Interaction Network
Click a node to explore
PHOSPHO2AOX1PDXKPNPOPDXP
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q8TCD6
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.30LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.83 [0.55–1.30]
RankingsWhere PHOSPHO2 stands among ~20K protein-coding genes
  • #15,655of 20,598
    Most Researched15
  • #13,662of 17,882
    Most Constrained (LOEUF)1.30
Genes detectedPHOSPHO2
Sources retrieved7 papers
Response time—
📄 Sources
7▼
1
Probing the substrate specificities of human PHOSPHO1 and PHOSPHO2.
PMID: 16054448
Biochim Biophys Acta · 2005
1.00
2
Identification of key genes and signaling pathways of liver cancer and model construction for prognosis and diagnosis based on bioinformatics analysis.
PMID: 40465781
PLoS One · 2025
0.86
3
Sofosbuvir induces gene expression for promoting cell proliferation and migration of hepatocellular carcinoma cells.
PMID: 35833210
Aging (Albany NY) · 2022
0.71
4
Site-directed mutations and kinetic studies show key residues involved in alkylammonium interactions and reveal two sites for phosphorylcholine in Pseudomonas aeruginosa phosphorylcholine phosphatase.
PMID: 21515416
Biochim Biophys Acta · 2011
0.57
5
Potent inhibition of mammalian ribonucleases by 3', 5'-pyrophosphate-linked nucleotides.
PMID: 10329690
J Biol Chem · 1999
0.43