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GeneE
26 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
PLCE1
phospholipase C epsilon 1
Chromosome 10 Β· 10q23.33
NCBI Gene: 51196Ensembl: ENSG00000138193.17HGNC: HGNC:17175UniProt: A0A8I5KXT2
190PubMed Papers
21Diseases
0Drugs
64Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
RESEARCH IMPACT
TrendingVariant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
positive regulation of lamellipodium assemblyglomerulus developmentcytosolplasma membranenephrotic syndrome, type 3nephrotic syndromeAbnormality of the skeletal systemhypertension
✦AI Summary

PLCE1 (phospholipase C epsilon 1) is a bifunctional enzyme that mediates the production of second messengers diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3), while also functioning as a Ras guanine-exchange factor (RasGEF) to regulate small GTPases. In podocytes, PLCE1 regulates lamellipodia formation downstream of AVIL to facilitate ARP2/3 complex assembly 1. The enzyme acts as an effector of heterotrimeric and small G-proteins, contributing to cell survival, growth, actin organization, and T-cell activation. PLCE1 mutations cause steroid-resistant nephrotic syndrome (SRNS), particularly congenital nephrotic syndrome, with specific mutations correlating with age of onset 2. PLCE1 was identified among the most frequently mutated genes in whole exome sequencing of SRNS patients 3 and is implicated in congenital nephrotic syndrome pathogenesis 4. Additionally, PLCE1 polymorphisms (rs2274223, rs3765524, rs3781264) are associated with esophageal squamous cell carcinoma (ESCC) susceptibility, with GG genotypes at rs2274223 conferring increased cancer risk 5. PLCE1 promotes ESCC progression by activating PKCΞ±-mediated phosphorylation of E2F1 to upregulate MCM7 and miR-106b-5p, driving cell-cycle progression and tumor development 6. Genome-wide association studies identified PLCE1 as a novel locus associated with preeclampsia and gestational hypertension, implicating renal glomerular function in pregnancy complications 78.

Sources cited
1
PLCE1 acts downstream of AVIL to allow ARP2/3 complex assembly and regulate lamellipodia formation in podocytes
PMID: 29058690
2
PLCE1 mutations cause steroid-resistant nephrotic syndrome with specific mutations correlating to age of onset
PMID: 25349199
3
PLCE1 is among the most frequently mutated genes in steroid-resistant nephrotic syndrome detected by whole exome sequencing
PMID: 29127259
4
PLCE1 pathogenic variants are implicated in congenital nephrotic syndrome
PMID: 34983935
5
PLCE1 rs2274223 GG genotype is a risk factor for esophageal cancer and interacts with smoking to increase cancer susceptibility
PMID: 36317220
6
PLCE1 promotes esophageal squamous cell carcinoma progression by activating PKCΞ±-mediated E2F1 phosphorylation to upregulate MCM7 and miR-106b-5p
PMID: 38117512
7
PLCE1 is a novel locus associated with preeclampsia and gestational hypertension, involved in renal glomerular function
PMID: 37248299
8
PLCE1 variants are associated with preeclampsia and related to kidney function in hypertensive disorders of pregnancy
PMID: 37285119
Disease Associationsβ“˜21
nephrotic syndrome, type 3Open Targets
0.77Strong
nephrotic syndromeOpen Targets
0.63Moderate
Abnormality of the skeletal systemOpen Targets
0.55Moderate
hypertensionOpen Targets
0.50Moderate
essential hypertensionOpen Targets
0.44Moderate
hypertension, pregnancy-inducedOpen Targets
0.43Moderate
aortic aneurysmOpen Targets
0.43Moderate
Increased blood pressureOpen Targets
0.42Moderate
Abdominal Aortic AneurysmOpen Targets
0.42Moderate
cardiovascular diseaseOpen Targets
0.40Weak
focal segmental glomerulosclerosisOpen Targets
0.40Weak
aneurysmOpen Targets
0.39Weak
open-angle glaucomaOpen Targets
0.38Weak
migraine disorderOpen Targets
0.38Weak
glaucomaOpen Targets
0.38Weak
preeclampsiaOpen Targets
0.37Weak
coronary artery diseaseOpen Targets
0.37Weak
familial idiopathic steroid-resistant nephrotic syndromeOpen Targets
0.37Weak
response to xenobiotic stimulusOpen Targets
0.37Weak
Inguinal herniaOpen Targets
0.35Weak
Nephrotic syndrome 3UniProt
Pathogenic Variants64
NM_016341.4(PLCE1):c.6132+1G>ALikely pathogenic
Nephrotic syndrome, type 3|not provided
β˜…β˜…β˜†β˜†2025
NM_016341.4(PLCE1):c.3338_3339del (p.Lys1113fs)Pathogenic
Nephrotic syndrome, type 3|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 1113
NM_016341.4(PLCE1):c.5979del (p.Gly1994fs)Pathogenic
not provided|Nephrotic syndrome, type 3
β˜…β˜…β˜†β˜†2024β†’ Residue 1994
NM_016341.4(PLCE1):c.4483C>T (p.Arg1495Ter)Pathogenic
Nephrotic syndrome, type 3|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 1495
NM_016341.4(PLCE1):c.4192dup (p.Leu1398fs)Pathogenic
not provided|Nephrotic syndrome, type 3
β˜…β˜…β˜†β˜†2024β†’ Residue 1398
NM_016341.4(PLCE1):c.961C>T (p.Arg321Ter)Pathogenic
Nephrotic syndrome, type 3
β˜…β˜…β˜†β˜†2024β†’ Residue 321
NM_016341.4(PLCE1):c.4506+1G>ALikely pathogenic
Nephrotic syndrome, type 3
β˜…β˜…β˜†β˜†2024
NM_016341.4(PLCE1):c.1477C>T (p.Arg493Ter)Pathogenic
Nephrotic syndrome, type 3|not provided
β˜…β˜…β˜†β˜†2023β†’ Residue 493
NM_016341.4(PLCE1):c.3736C>T (p.Arg1246Ter)Pathogenic
Nephrotic syndrome, type 3|not provided
β˜…β˜…β˜†β˜†2023β†’ Residue 1246
NM_016341.4(PLCE1):c.3058C>T (p.Gln1020Ter)Pathogenic
Nephrotic syndrome, type 3
β˜…β˜…β˜†β˜†2023β†’ Residue 1020
NM_016341.4(PLCE1):c.4978_4981del (p.Gln1660fs)Pathogenic
Nephrotic syndrome, type 3|Nephrotic syndrome|Focal segmental glomerulosclerosis|not provided
β˜…β˜…β˜†β˜†2023β†’ Residue 1660
NM_016341.4(PLCE1):c.1115T>A (p.Leu372Ter)Pathogenic
Nephrotic syndrome, type 3
β˜…β˜†β˜†β˜†2025β†’ Residue 372
NM_016341.4(PLCE1):c.2872_2873del (p.Val958fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 958
NM_016341.4(PLCE1):c.5881C>T (p.Arg1961Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 1961
NM_016341.4(PLCE1):c.789C>A (p.Tyr263Ter)Pathogenic
Nephrotic syndrome, type 3
β˜…β˜†β˜†β˜†2024β†’ Residue 263
NM_016341.4(PLCE1):c.3768del (p.Asn1257fs)Pathogenic
Nephrotic syndrome, type 3
β˜…β˜†β˜†β˜†2024β†’ Residue 1257
NM_016341.4(PLCE1):c.6377_6378del (p.Lys2126fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 2126
NM_016341.4(PLCE1):c.4580_4582delinsT (p.Ser1527fs)Likely pathogenic
Nephrotic syndrome, type 3
β˜…β˜†β˜†β˜†2024β†’ Residue 1527
NM_016341.4(PLCE1):c.2148del (p.Asp718fs)Likely pathogenic
Nephrotic syndrome, type 3
β˜…β˜†β˜†β˜†2024β†’ Residue 718
NM_016341.4(PLCE1):c.5677G>T (p.Glu1893Ter)Likely pathogenic
Nephrotic syndrome, type 3
β˜…β˜†β˜†β˜†2024β†’ Residue 1893
View on ClinVar β†—
Related Genes
HRASProtein interaction97%KRASProtein interaction97%ITPR1Protein interaction95%PIKFYVEProtein interaction94%PIP5KL1Protein interaction93%INF2Protein interaction93%
Tissue Expression6 tissues
Heart
100%
Lung
31%
Ovary
25%
Brain
18%
Liver
7%
Bone Marrow
2%
Gene Interaction Network
Click a node to explore
PLCE1HRASKRASITPR1PIKFYVEPIP5KL1INF2
PROTEIN STRUCTURE
Preparing viewer…
PDB2C5L Β· 1.90 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.56Moderately Constrained
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.48 [0.41–0.56]
RankingsWhere PLCE1 stands among ~20K protein-coding genes
  • #2,253of 20,598
    Most Researched190 Β· top quartile
  • #1,116of 5,498
    Most Pathogenic Variants64 Β· top quartile
  • #3,673of 17,882
    Most Constrained (LOEUF)0.56 Β· top quartile
Genes detectedPLCE1
Sources retrieved26 papers
Response timeβ€”
πŸ“„ Sources
26β–Ό
1
Polygenic prediction of preeclampsia and gestational hypertension.
PMID: 37248299
Nat Med Β· 2023
1.00
2
Genetic Risk Factors Associated With Preeclampsia and Hypertensive Disorders of Pregnancy.
PMID: 37285119
JAMA Cardiol Β· 2023
0.90
3
Whole Exome Sequencing of Patients with Steroid-Resistant Nephrotic Syndrome.
PMID: 29127259
Clin J Am Soc Nephrol Β· 2018
0.80
4
A single-gene cause in 29.5% of cases of steroid-resistant nephrotic syndrome.
PMID: 25349199
J Am Soc Nephrol Β· 2015
0.70
5
Decoding GΞ±q signaling.
PMID: 27012764
Life Sci Β· 2016
0.68