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GeneE
25 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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POLR1C
RNA polymerase I and III subunit C
Chromosome 6 Β· 6p21.1
NCBI Gene: 9533Ensembl: ENSG00000171453.20HGNC: HGNC:20194UniProt: A0A2R8YEZ4
161PubMed Papers
22Diseases
0Drugs
51Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
RESEARCH IMPACT
TrendingVariant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
termination of RNA polymerase III transcriptionRNA polymerase I complexprotein bindingRNA polymerase III complexHypomyelinating leukodystrophy with or without oligondontia and/or hypogonadismhypomyelinating leukodystrophy 11Treacher Collins syndrome 3Hypomyelination - hypogonadotropic hypogonadism - hypodontia
✦AI Summary

POLR1C encodes a core subunit of RNA polymerase I and III, essential enzymes that transcribe different classes of non-coding RNAs. 1 POLR1C functions as a structural component within the polymerase core, possibly acting as a clamp element regulating the enzyme's catalytic cleft. 1 As a shared subunit between Pol I and Pol III, POLR1C participates in transcribing ribosomal RNA precursors and transfer RNAs, respectively, making it critical for ribosome biogenesis and protein synthesis. Mutations in POLR1C cause two clinically distinct disorders: Treacher Collins syndrome (TCS) type 3 and hypomyelinating leukodystrophy (4H leukodystrophy). 2 TCS presents with craniofacial abnormalities including microtia, midface hypoplasia, and micrognathia, affecting approximately 1 in 50,000 live births. 2 Disease pathogenesis involves impaired ribosomal RNA synthesis in neural crest cells, leading to p53 accumulation and apoptosis. 3 4 In 4H leukodystrophy, biallelic POLR1C variants cause hypomyelination, hypodontia, and hypogonadotropic hypogonadism, with additional endocrine complications including delayed puberty (77% of cases) and short stature (61%). 5 6 The pleiotropic effects reflect POLR1C's widespread requirement for RNA synthesis across multiple developing tissues, particularly those with high protein synthesis demands.

Sources cited
1
POLR1C is a Pol III subunit; mutations cause hypomyelinating leukodystrophy and are associated with tissue-specific diseases
PMID: 34395528
2
POLR1C mutations cause Treacher Collins syndrome type 3 with craniofacial abnormalities; TCS occurs at 1 in 50,000 live births
PMID: 34573374
3
POLR1C deletion in neural crest cells diminishes rRNA synthesis, causes p53 accumulation and apoptosis, leading to craniofacial anomalies
PMID: 35881792
4
POLR1C mutations in TCS activate p53 pathway; zebrafish model demonstrates disease pathogenesis through p53-dependent mechanisms
PMID: 26972049
5
POLR1C mutations cause 4H leukodystrophy with delayed puberty (77%) and short stature (61%); biallelic variants are autosomal recessive
PMID: 33005949
6
POLR1C biallelic variants associated with craniofacial abnormalities in leukodystrophy including bitemporal narrowing and midface abnormalities
PMID: 37197783
Disease Associationsβ“˜22
Hypomyelinating leukodystrophy with or without oligondontia and/or hypogonadismOpen Targets
0.75Strong
hypomyelinating leukodystrophy 11Open Targets
0.74Strong
Treacher Collins syndrome 3Open Targets
0.72Strong
Hypomyelination - hypogonadotropic hypogonadism - hypodontiaOpen Targets
0.63Moderate
Treacher-Collins syndromeOpen Targets
0.60Moderate
POLR1C-related disorderOpen Targets
0.56Moderate
genetic disorderOpen Targets
0.41Moderate
leukodystrophyOpen Targets
0.38Weak
hypomyelination-hypogonadotropic hypogonadism-hypodontia syndromeOpen Targets
0.37Weak
Hearing impairmentOpen Targets
0.15Weak
early-onset non-syndromic cataractOpen Targets
0.11Weak
Total congenital cataractOpen Targets
0.10Suggestive
Partial congenital cataractOpen Targets
0.10Suggestive
Cataract-microcornea syndromeOpen Targets
0.10Suggestive
early-onset nuclear cataractOpen Targets
0.09Suggestive
AllergyOpen Targets
0.09Suggestive
early-onset zonular cataractOpen Targets
0.09Suggestive
hereditary hyperferritinemia with congenital cataractsOpen Targets
0.08Suggestive
pulverulent cataractOpen Targets
0.08Suggestive
isolated ectopia lentisOpen Targets
0.08Suggestive
Leukodystrophy, hypomyelinating, 11UniProt
Treacher Collins syndrome 3UniProt
Pathogenic Variants51
NM_203290.4(POLR1C):c.836G>A (p.Arg279Gln)Pathogenic
Treacher Collins syndrome 3|not provided|Hypomyelinating leukodystrophy 11|POLR1C-related disorder|Hypomyelinating leukodystrophy 11;Treacher Collins syndrome 3|Inborn genetic diseases
β˜…β˜…β˜†β˜†2026β†’ Residue 279
NM_203290.4(POLR1C):c.835C>T (p.Arg279Trp)Pathogenic
Treacher Collins syndrome 3|not provided|Hypomyelinating leukodystrophy 11|Hypomyelinating leukodystrophy 11;Treacher Collins syndrome 3
β˜…β˜…β˜†β˜†2026β†’ Residue 279
NM_203290.4(POLR1C):c.70-2A>GLikely pathogenic
Treacher Collins syndrome 3;Hypomyelinating leukodystrophy 11|Hypomyelinating leukodystrophy 11
β˜…β˜…β˜†β˜†2025
NM_203290.4(POLR1C):c.88C>T (p.Pro30Ser)Pathogenic
Hypomyelinating leukodystrophy 11|Treacher Collins syndrome 3;Hypomyelinating leukodystrophy 11|POLR1C-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 30
NM_203290.4(POLR1C):c.229C>T (p.Arg77Ter)Pathogenic
not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 77
NM_203290.4(POLR1C):c.793C>T (p.Gln265Ter)Likely pathogenic
not provided|Treacher Collins syndrome 3;Hypomyelinating leukodystrophy 11
β˜…β˜…β˜†β˜†2024β†’ Residue 265
NM_203290.4(POLR1C):c.70-1G>APathogenic
not provided|Hypomyelinating leukodystrophy 11|Hypomyelinating leukodystrophy 11;Treacher Collins syndrome 3
β˜…β˜…β˜†β˜†2024
NM_203290.4(POLR1C):c.313A>T (p.Ile105Phe)Pathogenic
Hypomyelinating leukodystrophy 11|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 105
NM_203290.4(POLR1C):c.525del (p.Thr174_Trp175insTer)Pathogenic
Treacher Collins syndrome 3|Hypomyelinating leukodystrophy 11|Treacher Collins syndrome 3;Hypomyelinating leukodystrophy 11
β˜…β˜…β˜†β˜†2024β†’ Residue 174
NM_203290.4(POLR1C):c.208dup (p.Ala70fs)Pathogenic
Hypomyelinating leukodystrophy 11|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 70
NM_203290.4(POLR1C):c.326G>A (p.Arg109His)Pathogenic
Hypomyelinating leukodystrophy 11|Treacher Collins syndrome 3|POLR1C-related disorder
β˜…β˜…β˜†β˜†2023β†’ Residue 109
NM_203290.4(POLR1C):c.916_920del (p.Tyr306fs)Pathogenic
Hypomyelinating leukodystrophy 11|Treacher Collins syndrome 3;Hypomyelinating leukodystrophy 11|not provided
β˜…β˜…β˜†β˜†2023β†’ Residue 306
NM_203290.4(POLR1C):c.325C>T (p.Arg109Cys)Pathogenic
Hypomyelinating leukodystrophy 11
β˜…β˜…β˜†β˜†2023β†’ Residue 109
NM_203290.4(POLR1C):c.232C>T (p.Arg78Ter)Pathogenic
not provided|Treacher Collins syndrome 3;Hypomyelinating leukodystrophy 11|Treacher Collins syndrome 3
β˜…β˜…β˜†β˜†2022β†’ Residue 78
NM_203290.4(POLR1C):c.616del (p.Gln206fs)Pathogenic
Hypomyelinating leukodystrophy 11|Treacher Collins syndrome 3;Hypomyelinating leukodystrophy 11
β˜…β˜…β˜†β˜†2017β†’ Residue 206
NM_203290.4(POLR1C):c.699C>G (p.Tyr233Ter)Pathogenic
not provided|Hypomyelinating leukodystrophy 11
β˜…β˜…β˜†β˜†2016β†’ Residue 233
NM_203290.4(POLR1C):c.77C>T (p.Thr26Ile)Pathogenic
Hypomyelinating leukodystrophy 11
β˜…β˜…β˜†β˜†β†’ Residue 26
NM_203290.4(POLR1C):c.785T>C (p.Ile262Thr)Pathogenic
Hypomyelinating leukodystrophy 11
β˜…β˜…β˜†β˜†β†’ Residue 262
NM_203290.4(POLR1C):c.934T>C (p.Ser312Pro)Likely pathogenic
Hypomyelinating leukodystrophy 11
β˜…β˜†β˜†β˜†2025β†’ Residue 312
NM_203290.4(POLR1C):c.907C>T (p.Arg303Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 303
View on ClinVar β†—
Related Genes
MRPS6Protein interaction100%MRPS9Protein interaction100%MRPS16Protein interaction100%CRCPProtein interaction100%POLR3GProtein interaction100%POLR3CProtein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Liver
66%
Ovary
58%
Lung
46%
Heart
36%
Brain
34%
Gene Interaction Network
Click a node to explore
POLR1CMRPS6MRPS9MRPS16CRCPPOLR3GPOLR3C
PROTEIN STRUCTURE
Preparing viewer…
PDB7OB9 Β· 2.70 Γ… Β· EM
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
1.26LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.95 [0.73–1.26]
RankingsWhere POLR1C stands among ~20K protein-coding genes
  • #2,795of 20,598
    Most Researched161 Β· top quartile
  • #1,305of 5,498
    Most Pathogenic Variants51 Β· top quartile
  • #13,292of 17,882
    Most Constrained (LOEUF)1.26
Genes detectedPOLR1C
Sources retrieved25 papers
Response timeβ€”
πŸ“„ Sources
25β–Ό
1
Treacher Collins Syndrome: Genetics, Clinical Features and Management.
PMID: 34573374
Genes (Basel) Β· 2021
1.00
2
A clinically-relevant residue of POLR1D is required for Drosophila development.
PMID: 35656583
Dev Dyn Β· 2022
0.92
3
PMID: 22855961
0.90
4
RNA Polymerase III Subunit Mutations in Genetic Diseases.
PMID: 34395528
Front Mol Biosci Β· 2021
0.80
5
Comprehensive genotype-phenotype analysis in POLR3-related disorders.
PMID: 40684265
HGG Adv Β· 2025
0.70