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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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PTPRK
protein tyrosine phosphatase receptor type K
Chromosome 6 · 6q22.33
NCBI Gene: 5796Ensembl: ENSG00000152894.16HGNC: HGNC:9674UniProt: B4DHC3
86PubMed Papers
0Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Receptor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein tyrosine phosphatase activityfocal adhesion assemblyplasma membranecell-cell junction
✦AI Summary

PTPRK (protein tyrosine phosphatase receptor type K) is a membrane-bound receptor tyrosine phosphatase that functions as a tumor suppressor and regulator of cellular adhesion and metabolism 1. The protein contains an extracellular domain for cell-cell adhesion, a transmembrane region, and two intracellular catalytic domains, and undergoes proteolytic processing by Furin, ADAM10, and γ-secretase to generate functional subunits including an intracellular fragment that regulates β-catenin signaling 1. PTPRK negatively regulates EGFR signaling in keratinocytes and intestinal cells, with its expression cooperatively controlled by Notch and TGF-β pathways 23. In metabolic contexts, PTPRK promotes hepatocyte reprogramming by regulating glycolysis and lipogenesis, targeting fructose-1,6-bisphosphatase 1 to enhance PPARγ-mediated lipogenic signaling 4. Clinically, PTPRK demonstrates tumor suppressor activity in colorectal cancer through both catalytic-dependent and independent mechanisms, promoting intestinal repair and suppressing epithelial-mesenchymal transition 5. Loss of PTPRK expression is associated with celiac disease pathology and contributes to increased intestinal proliferation 3. Additionally, PTPRK variants are associated with Alzheimer's disease risk in Hispanic populations, suggesting roles in neuronal development 6.

Sources cited
1
PTPRK structure, proteolytic processing, and β-catenin signaling regulation
PMID: 40355891
2
Cooperative regulation by Notch and TGF-β pathways in keratinocytes
PMID: 25609089
3
Role in hepatocyte metabolic reprogramming, glycolysis, and lipogenesis
PMID: 39496584
4
Tumor suppressor function in colorectal cancer and catalytic-independent mechanisms
PMID: 38904097
5
Decreased expression in celiac disease and role in intestinal proliferation
PMID: 36611909
6
Association with Alzheimer's disease risk in Hispanic populations
PMID: 40676597
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CTNNB1Protein interaction100%RSPO2Protein interaction79%MAP3K21Protein interaction75%PDIK1LProtein interaction74%GUCY2FProtein interaction73%RSPO3Protein interaction70%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
Click a node to explore
PTPRKCTNNB1RSPO2MAP3K21PDIK1LGUCY2FRSPO3
PROTEIN STRUCTURE
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PDB2C7S · 1.95 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.51Moderately Constrained
pLIⓘ
0.11Tolerant
Observed/Expected LoF0.41 [0.34–0.51]
RankingsWhere PTPRK stands among ~20K protein-coding genes
  • #5,564of 20,598
    Most Researched86
  • #3,107of 17,882
    Most Constrained (LOEUF)0.51 · top quartile
Genes detectedPTPRK
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
PTPRK regulates glycolysis and de novo lipogenesis to promote hepatocyte metabolic reprogramming in obesity.
PMID: 39496584
Nat Commun · 2024
1.00
2
Notch and TGF-β pathways cooperatively regulate receptor protein tyrosine phosphatase-κ (PTPRK) gene expression in human primary keratinocytes.
PMID: 25609089
Mol Biol Cell · 2015
0.90
3
Protein tyrosine phosphatase receptor type kappa (PTPRK) revisited: evolving insights into structure, function, and pathology.
PMID: 40355891
J Transl Med · 2025
0.80
4
Organoid cultures of early-onset colorectal cancers reveal distinct and rare genetic profiles.
PMID: 32217638
Gut · 2020
0.70
5
Multi-ancestry genome-wide meta-analysis of 56,241 individuals identifies known and novel cross-population and ancestry-specific associations as novel risk loci for Alzheimer's disease.
PMID: 40676597
Genome Biol · 2025
0.60