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GeneE
25 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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PTX3
pentraxin 3
Chromosome 3 · 3q25.32
NCBI Gene: 5806Ensembl: ENSG00000163661.5HGNC: HGNC:9692UniProt: P26022
494PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
RESEARCH IMPACT
Highly StudiedTrending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
complement component C1q complex bindingprotein bindingidentical protein bindingvirion bindingpolycystic ovary syndromeneoplasmSepsisCOVID-19
✦AI Summary

PTX3 (pentraxin 3) is a secretory pattern recognition receptor that serves as a multifaceted regulator of innate immunity and tissue homeostasis. Primarily, PTX3 functions in inflammatory regulation and pathogen resistance through complement activation and immune cell modulation 1. Mechanistically, PTX3 regulates macrophage polarization and infiltration in tissue microenvironments. In glioblastoma, PTX3 mediates macrophage infiltration, migration, and inflammation-resolving-polarization, thereby modulating an immunosuppressive microenvironment 2. Conversely, in hepatic ischemia-reperfusion injury, PTX3 promotes M1 macrophage polarization, exacerbating hepatocyte pyroptosis 3. PTX3 expression is epigenetically regulated through the PRMT1-histone methylation axis and post-transcriptionally controlled via m6A-YTHDF3-dependent mRNA degradation 45. Beyond macrophage regulation, PTX3 is strategically localized in lymphatic vessel extracellular matrix, where it organizes lymphatic architecture and enables dendritic cell trafficking 6. Clinically, PTX3 emerges as a significant biomarker: elevated plasma levels associate with leprosy susceptibility and decrease after treatment 1, while high PTX3 expression in gliomas correlates with poor prognosis, higher WHO grade, and altered immune infiltration patterns 7. Additionally, PTX3 contributes to endothelial dysfunction by suppressing nitric oxide synthesis and promoting vascular inflammation 8, suggesting therapeutic potential in multiple disease contexts.

Sources cited
1
PTX3 expression is regulated by PRMT1-mediated H4R3me2a epigenetic mark; PTX3 secretion regulates ferritinophagic flux and autophagy balance in IDH1 mutant gliomas
PMID: 36647288
2
PTX3 mRNA is degraded via m6A-YTHDF3-dependent mechanism; higher PTX3 expression promotes M2 macrophage activation and correlates with asthma severity
PMID: 37957139
3
PTX3 mediates macrophage infiltration, migration, and inflammation-resolving-polarization in glioblastoma; PTX3 expression predicts worse survival and immunosuppressive microenvironment
PMID: 35855654
4
PTX3 promotes M1 macrophage polarization during hepatic ischemia-reperfusion injury, exacerbating hepatocyte pyroptosis
PMID: 39549552
5
PTX3 is localized in lymphatic vessel extracellular matrix and is essential for lymphatic vessel organization and dendritic cell trafficking
PMID: 39640269
6
PTX3 promotes vascular inflammation and endothelial dysfunction by decreasing nitric oxide synthesis and interacting with growth factors
PMID: 31331488
7
PTX3 is a soluble pattern recognition receptor; plasma PTX3 levels are elevated in leprosy patients and correlate with disease susceptibility
PMID: 38053036
8
PTX3 expression in gliomas correlates with WHO grade, IDH mutation status, immune cell infiltration, and poor survival outcomes
PMID: 40656950
Disease Associationsⓘ20
polycystic ovary syndromeOpen Targets
0.12Weak
neoplasmOpen Targets
0.12Weak
SepsisOpen Targets
0.12Weak
COVID-19Open Targets
0.11Weak
rheumatoid arthritisOpen Targets
0.11Weak
breast cancerOpen Targets
0.11Weak
hepatocellular carcinomaOpen Targets
0.11Weak
infectionOpen Targets
0.11Weak
cancerOpen Targets
0.11Weak
coronary artery diseaseOpen Targets
0.11Weak
glioblastoma multiformeOpen Targets
0.11Weak
Female infertility due to fertilization defectOpen Targets
0.11Weak
chronic obstructive pulmonary diseaseOpen Targets
0.10Weak
chronic kidney diseaseOpen Targets
0.10Weak
Ito hypomelanosisOpen Targets
0.10Weak
non-alcoholic fatty liver diseaseOpen Targets
0.10Weak
strokeOpen Targets
0.10Weak
gestational diabetesOpen Targets
0.10Weak
gliomaOpen Targets
0.10Suggestive
pulmonary arterial hypertensionOpen Targets
0.10Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CFHR5Protein interaction99%SELPProtein interaction99%FGF2Protein interaction98%TNFAIP6Protein interaction98%FGF17Protein interaction95%C1QBProtein interaction91%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
56%
Brain
2%
Ovary
2%
Heart
2%
Liver
1%
Gene Interaction Network
Click a node to explore
PTX3CFHR5SELPFGF2TNFAIP6FGF17C1QB
PROTEIN STRUCTURE
Preparing viewer…
PDB8PVQ · 2.43 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.32LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.96 [0.71–1.32]
RankingsWhere PTX3 stands among ~20K protein-coding genes
  • #539of 20,598
    Most Researched494 · top 5%
  • #13,889of 17,882
    Most Constrained (LOEUF)1.32
Genes detectedPTX3
Sources retrieved25 papers
Response time—
📄 Sources
25▼
1
PRMT1 driven PTX3 regulates ferritinophagy in glioma.
PMID: 36647288
Autophagy · 2023
1.00
2
RNA m
PMID: 37957139
Nat Commun · 2023
0.90
3
PTX3 mediates the infiltration, migration, and inflammation-resolving-polarization of macrophages in glioblastoma.
PMID: 35855654
CNS Neurosci Ther · 2022
0.80
4
PTX3 exacerbates hepatocyte pyroptosis in hepatic ischemia-reperfusion injury by promoting macrophage M1 polarization.
PMID: 39549552
Int Immunopharmacol · 2024
0.70
5
[Pentraxin 3].
PMID: 21874796
Rinsho Byori · 2011
0.68