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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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PURB
purine rich element binding protein B
Chromosome 7 · 7p13
NCBI Gene: 5814Ensembl: ENSG00000146676.10HGNC: HGNC:9702UniProt: Q96QR8
101PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingRNA bindingnucleoplasmDNA-binding transcription repressor activity, RNA polymerase II-specificEscherichia coli Infectionsclonal hematopoiesisagingalcohol drinking
✦AI Summary

PURB (purine-rich element binding protein B) is a dual DNA/RNA-binding transcriptional regulator that functions as both an activator and repressor depending on cellular context 1. As a repressor, PURB binds purine-rich DNA elements to silence lineage-specific genes, including ACTA2 and MYOCD in smooth muscle cells, and participates in long-term silencing of tissue-specific genes through a complex with Cbx1 and Sp3 that recruits polycomb repressive machinery 2. PURB also acts as a corepressor of p53-dependent transcription in a promoter-specific manner, recognizing unique DNA elements at targets like p21 via interaction with the lncRNA HOTAIR and the EZH2 histone methyltransferase 1. Clinically, PURB dysregulation is implicated in multiple malignancies. PURB is overexpressed in human cancers and promotes ovarian cancer progression through repression of DDB2, activating oncogenic TGF-β signaling 3. Conversely, circUGP2-mediated PURB activation of ADGRB1 suppresses intrahepatic cholangiocarcinoma by stabilizing p53 4. PURB deletions at chromosome 7 occur in myelodysplastic syndrome and acute myelogenous leukemia, particularly concurrent with PURA deletions, suggesting roles in myeloid development 5. Additionally, PURB inhibition by bacterial tsRNA impairs osteogenesis 6, indicating broader physiological significance beyond cancer contexts.

Sources cited
1
PURB acts as a transcriptional corepressor for p53 in acetylation-dependent manner, requires HOTAIR binding, recruits EZH2 for promoter-specific repression
PMID: 40563010
2
PURB forms a complex with Cbx1 and Sp3 that represses lineage-specific genes via H3K27me3 deposition through PRC2 complex interaction
PMID: 35605661
3
PURB is overexpressed in ovarian cancer and represses DDB2 transcription, promoting cancer progression through TGF-β/SMAD pathway activation
PMID: 39482389
4
circUGP2 functions as a transcriptional co-activator of PURB for ADGRB1 expression, which suppresses intrahepatic cholangiocarcinoma via p53 signaling
PMID: 39120980
5
PURB is localized to chromosome 7p13 and hemizygously deleted in myelodysplastic syndrome and acute myelogenous leukemia, often concurrent with PURA deletions
PMID: 11417483
6
Bacterial tsRNA tRF-Pro-GGG-1 binds PURB and inhibits PURB-mediated transcription of COL1A1, impairing osteogenesis
PMID: 41491488
Disease Associationsⓘ20
Escherichia coli InfectionsOpen Targets
0.31Weak
clonal hematopoiesisOpen Targets
0.27Weak
agingOpen Targets
0.26Weak
alcohol drinkingOpen Targets
0.18Weak
hemiplegiaOpen Targets
0.18Weak
intelligenceOpen Targets
0.18Weak
breast benign neoplasmOpen Targets
0.05Suggestive
obesityOpen Targets
0.03Suggestive
HyperglycemiaOpen Targets
0.03Suggestive
acute myeloid leukemiaOpen Targets
0.02Suggestive
Glucose intoleranceOpen Targets
0.02Suggestive
infectionOpen Targets
0.02Suggestive
intrahepatic cholangiocarcinomaOpen Targets
0.01Suggestive
gastric cancerOpen Targets
0.01Suggestive
neoplasmOpen Targets
0.01Suggestive
myelodysplastic syndromeOpen Targets
0.01Suggestive
ataxia telangiectasiaOpen Targets
0.01Suggestive
triple-negative breast cancerOpen Targets
0.01Suggestive
cancerOpen Targets
0.01Suggestive
steatosisOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
IFRD2Shared pathway100%YBX1Protein interaction95%MYH7BProtein interaction87%SOX6Protein interaction87%POLDIP3Protein interaction79%RPSAProtein interaction71%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
66%
Lung
45%
Ovary
37%
Heart
36%
Liver
26%
Gene Interaction Network
Click a node to explore
PURBIFRD2YBX1MYH7BSOX6POLDIP3RPSA
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q96QR8
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.22LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.74 [0.46–1.22]
RankingsWhere PURB stands among ~20K protein-coding genes
  • #4,741of 20,598
    Most Researched101 · top quartile
  • #12,877of 17,882
    Most Constrained (LOEUF)1.22
Genes detectedPURB
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
A novel Cbx1, PurB, and Sp3 complex mediates long-term silencing of tissue- and lineage-specific genes.
PMID: 35605661
J Biol Chem · 2022
1.00
2
The PURB-HOTAIR complex regulates p53-dependent promoter-specific transcriptional activation.
PMID: 40563010
Nat Struct Mol Biol · 2025
0.90
3
CircUGP2 Suppresses Intrahepatic Cholangiocarcinoma Progression via p53 Signaling Through Interacting With PURB to Regulate ADGRB1 Transcription and Sponging miR-3191-5p.
PMID: 39120980
Adv Sci (Weinh) · 2024
0.80
4
LINC01320 facilitates cell proliferation and migration of ovarian cancer via regulating PURB/DDB2/NEDD4L/TGF-β axis.
PMID: 39482389
Sci Rep · 2024
0.70
5
Deletions of PURA, at 5q31, and PURB, at 7p13, in myelodysplastic syndrome and progression to acute myelogenous leukemia.
PMID: 11417483
Leukemia · 2001
0.60