HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
RAB3D
RAB3D, member RAS oncogene family
Chromosome 19 · 19p13.2
NCBI Gene: 9545Ensembl: ENSG00000105514.9HGNC: HGNC:9779UniProt: A0A024R7G2
55PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
bone resorptionpositive regulation of regulated secretory pathwayprotein bindingsecretory vesiclehypertensionneoplasmcancerglioma
✦AI Summary

RAB3D is a small GTPase belonging to the RAB3 family that regulates intracellular membrane trafficking, particularly in regulated exocytosis and secretion 1. The protein localizes primarily to secretory vesicles in non-neuronal cells, including lamellar bodies in alveolar epithelial type II cells and secretory granules in various exocrine and endocrine tissues 12. RAB3D cycles between GDP-bound (inactive) and GTP-bound (active) forms to control vesicle formation, movement, and fusion processes 1. In hepatocytes, RAB3D localizes to the trans-Golgi and forms complexes with GOLGA4 and MYH10, playing a crucial role in maintaining Golgi organization and proper protein trafficking 34. The protein interacts with COPI vesiculation machinery and is essential for intra-Golgi transport 4. Clinically, RAB3D dysfunction is implicated in alcohol-associated liver disease, where ethanol-induced downregulation leads to Golgi disorganization and abnormal protein trafficking 34. Additionally, RAB3D overexpression has been associated with cancer progression, particularly in melanoma and osteosarcoma, where it promotes cell proliferation, migration, and invasion 567.

Sources cited
1
RAB3D is a small GTPase regulating exocytosis in non-neuronal cells and localizes to secretory vesicles
PMID: 12168804
2
RAB3D localizes to lamellar bodies in alveolar epithelial type II cells involved in regulated exocytosis
PMID: 12933357
3
RAB3D forms complexes with GOLGA4 and MYH10 in hepatocyte trans-Golgi and its downregulation leads to Golgi fragmentation
PMID: 38591519
4
RAB3D is required for COPI vesiculation in Golgi and ethanol treatment causes its redistribution from trans-Golgi
PMID: 34494400
5
RAB3D overexpression promotes melanoma cell proliferation, migration, and invasion
PMID: 35549813
6
RAB3D promotes osteosarcoma progression and is regulated by circRNA/miRNA networks
PMID: 37559140
7
RAB3D plays oncogenic roles in various tumor types and is associated with decreased survival
PMID: 33982832
Disease Associationsⓘ20
hypertensionOpen Targets
0.19Weak
neoplasmOpen Targets
0.09Suggestive
cancerOpen Targets
0.08Suggestive
gliomaOpen Targets
0.07Suggestive
response to xenobiotic stimulusOpen Targets
0.07Suggestive
non-small cell lung carcinomaOpen Targets
0.07Suggestive
osteosarcomaOpen Targets
0.05Suggestive
colorectal carcinomaOpen Targets
0.04Suggestive
colorectal cancerOpen Targets
0.03Suggestive
esophageal squamous cell carcinomaOpen Targets
0.03Suggestive
breast cancerOpen Targets
0.02Suggestive
melanomaOpen Targets
0.02Suggestive
renal cell carcinomaOpen Targets
0.02Suggestive
acute myeloid leukemiaOpen Targets
0.02Suggestive
cardiovascular diseaseOpen Targets
0.02Suggestive
posterior cortical atrophyOpen Targets
0.01Suggestive
laryngotracheoesophageal cleftOpen Targets
0.01Suggestive
tuberculosisOpen Targets
0.01Suggestive
synovial sarcomaOpen Targets
0.01Suggestive
Sjogren syndromeOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
LRPAP1Protein interaction71%RABGGTAProtein interaction70%RAB15Shared pathway33%STXBP5Shared pathway33%SYCNShared pathway25%EXOC3L1Shared pathway25%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
69%
Lung
59%
Heart
26%
Ovary
22%
Liver
11%
Gene Interaction Network
Click a node to explore
RAB3DLRPAP1RABGGTARAB15STXBP5SYCNEXOC3L1
PROTEIN STRUCTURE
Preparing viewer…
PDB2GF9 · 1.53 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.24LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.83 [0.57–1.24]
RankingsWhere RAB3D stands among ~20K protein-coding genes
  • #8,242of 20,598
    Most Researched55
  • #13,023of 17,882
    Most Constrained (LOEUF)1.24
Genes detectedRAB3D
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Alcohol-induced Golgiphagy is triggered by the downregulation of Golgi GTPase RAB3D.
PMID: 38591519
Autophagy · 2024
1.00
2
Rab3D: a regulator of exocytosis in non-neuronal cells.
PMID: 12168804
Histol Histopathol · 2002
0.90
3
Rab3 proteins and cancer: Exit strategies.
PMID: 33982832
J Cell Biochem · 2021
0.80
4
Rab3D and actin reveal distinct lamellar body subpopulations in alveolar epithelial type II cells.
PMID: 12933357
Am J Respir Cell Mol Biol · 2004
0.70
5
Alcohol-Induced Liver Injury: Down-regulation and Redistribution of Rab3D Results in Atypical Protein Trafficking.
PMID: 34494400
Hepatol Commun · 2022
0.60