HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
RPS4Y2
ribosomal protein S4 Y-linked 2
Chromosome Y · Yq11.223
NCBI Gene: 140032Ensembl: ENSG00000280969.2HGNC: HGNC:18501UniProt: Q8TD47
23PubMed Papers
12Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
structural constituent of ribosometranslationcytosolic small ribosomal subunitRNA bindinginfluenzaCOVID-19severe acute respiratory syndromeautism
✦AI Summary

RPS4Y2 is a Y chrY-linked ribosomal protein gene that serves as a structural constituent of the cytosolic small ribosomal subunit and plays a role in protein translation 1. Unlike its ubiquitously expressed X-linked homologue RPS4X, RPS4Y2 exhibits testis-specific and prostate-restricted expression patterns 1. The gene arose through duplication from RPS4Y1 approximately 35 million years ago after the divergence of New World monkeys 2. Evolutionary analysis reveals that RPS4Y2 has been under positive selection in the human lineage, representing the first evidence of positive selection acting on a ribosomal protein gene 2. Despite accumulating amino acid changes since duplication, RPS4Y2 maintains a structurally conserved three-dimensional architecture with novel C-terminal features that may indicate functional specialization in spermatogenesis 1. The protein shows higher expression in testis biopsies containing germ cells and may be important for germ cell development 1. RPS4Y2 has been identified as a hub gene in allergic rhinitis networks 3 and as a potential biomarker for metabolic-associated fatty liver disease subtypes 4, though its primary function remains centered on male fertility and spermatogenesis.

Sources cited
1
RPS4Y2 has testis-specific expression, is structurally conserved, and may be important for germ cell development
PMID: 20459660
2
RPS4Y2 arose from duplication 35 million years ago and shows evidence of positive selection
PMID: 18477388
3
RPS4Y2 identified as hub gene in allergic rhinitis gene network
PMID: 32842359
4
RPS4Y2 serves as potential biomarker for metabolic-associated fatty liver disease
PMID: 32494880
⚠Limited data available — This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ12
influenzaOpen Targets
0.46Moderate
COVID-19Open Targets
0.37Weak
severe acute respiratory syndromeOpen Targets
0.37Weak
autismOpen Targets
0.02Suggestive
neoplasmOpen Targets
0.01Suggestive
azoospermiaOpen Targets
0.01Suggestive
infertilityOpen Targets
0.00Suggestive
prostate cancerOpen Targets
0.00Suggestive
cancerOpen Targets
0.00Suggestive
myeloid leukemiaOpen Targets
0.00Suggestive
melanomaOpen Targets
0.00Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SRBD1Shared pathway100%RPS25Protein interaction100%RPS20Protein interaction100%RPL8Protein interaction100%RPL23AProtein interaction100%RPS15Protein interaction100%
Tissue Expression6 tissues
Bone Marrow
100%
Heart
0%
Lung
0%
Ovary
0%
Liver
0%
Brain
0%
Gene Interaction Network
Click a node to explore
RPS4Y2SRBD1RPS25RPS20RPL8RPL23ARPS15
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q8TD47
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
2.37LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.20 [0.66–2.37]
RankingsWhere RPS4Y2 stands among ~20K protein-coding genes
  • #13,507of 20,598
    Most Researched23
  • #17,859of 17,882
    Most Constrained (LOEUF)2.37
Genes detectedRPS4Y2
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
[Integrated bioinformatics analysis of key genes in allergic rhinitis].
PMID: 32842359
Zhonghua Er Bi Yan Hou Tou Jing Wai Ke Za Zhi · 2020
1.00
2
A deletion of a novel heat shock gene on the Y chromosome associated with azoospermia.
PMID: 15734897
Mol Hum Reprod · 2005
0.90
3
Isoform-Level Gene Expression Profiles of Human Y Chromosome Azoospermia Factor Genes and Their X Chromosome Paralogs in the Testicular Tissue of Non-Obstructive Azoospermia Patients.
PMID: 26162009
J Proteome Res · 2015
0.80
4
RPS4Y gene family evolution in primates.
PMID: 18477388
BMC Evol Biol · 2008
0.70
5
The human RPS4 paralogue on Yq11.223 encodes a structurally conserved ribosomal protein and is preferentially expressed during spermatogenesis.
PMID: 20459660
BMC Mol Biol · 2010
0.60