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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SRBD1
S1 RNA binding domain 1
Chromosome 2 · 2p21
NCBI Gene: 55133Ensembl: ENSG00000068784.14HGNC: HGNC:25521UniProt: B7Z6X7
70PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
structural constituent of ribosometranslationmRNA bindingnucleolusneurodegenerative diseaseAbnormality of the skeletal systemCoughosteoarthritis, hip
✦AI Summary

SRBD1 (S1 RNA binding domain 1) is a DNA- and histone-binding protein essential for accurate chromosome 2 during mitosis 1. Localized to mitotic chromosome 2 1, SRBD1 promotes chromosome 2 by facilitating topoisomerase IIα recruitment to condensed chr2, preventing anaphase failure and the formation of chr2 bridges 1. During prophase, SRBD1 safeguards the decatenation process to prevent difficult-to-resolve DNA structures that cause missegregation 2. SRBD1 inactivation causes micronuclei, chr2 bridges, and cell death 1. Beyond mitotic functions, SRBD1 regulates nucleus pulposus cell senescence through selective autophagy pathways; its accumulation promotes cellular senescence via AKT1/p53 and RB/p16 signaling 3. Clinically, SRBD1 polymorphisms are associated with primary open-angle glaucoma and normal-tension glaucoma susceptibility in humans 4, with shared genetic risk loci identified across human and canine populations 5. In non-small cell lung cancer, SRBD1 silencing inhibits proliferation and promotes apoptosis, suggesting oncogenic functions 6. The protein represents a multi-functional genome maintenance factor with implications for both degenerative and neoplastic diseases.

Sources cited
1
SRBD1 localizes to mitotic chromosome axes, facilitates TOP2A localization, and is required for chromosome segregation and decatenation
PMID: 39955279
2
SRBD1 is a DNA-binding protein component of the mitotic chromatid axis required for sister chromatid segregation and safeguarding prophase decatenation
PMID: 40106440
3
SRBD1 accumulation triggers nucleus pulposus cell senescence via AKT1/p53 and RB/p16 pathways when autophagy clearance is impaired
PMID: 38169523
4
SRBD1 rs3213787 polymorphism is associated with primary open-angle glaucoma including normal-tension and high-tension glaucoma
PMID: 21508110
5
SRBD1 polymorphisms are glaucoma susceptibility loci shared between humans and dogs
PMID: 24040232
6
SRBD1 silencing in non-small cell lung cancer inhibits cell proliferation and promotes apoptosis, with altered expression of oncogenic factors
PMID: 32010555
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.47Moderate
Abnormality of the skeletal systemOpen Targets
0.40Moderate
CoughOpen Targets
0.39Weak
osteoarthritis, hipOpen Targets
0.36Weak
cholelithiasisOpen Targets
0.34Weak
response to angiotensin-converting enzyme inhibitorOpen Targets
0.31Weak
hemorrhoidOpen Targets
0.30Weak
response to antihypertensive drugOpen Targets
0.30Weak
total hip arthroplastyOpen Targets
0.29Weak
glaucomaOpen Targets
0.27Weak
renal osteodystrophyOpen Targets
0.27Weak
alcohol drinkingOpen Targets
0.27Weak
endocrine neoplasmOpen Targets
0.26Weak
chronic laryngitisOpen Targets
0.12Weak
coronary artery diseaseOpen Targets
0.11Weak
cervical carcinomaOpen Targets
0.10Weak
Abruptio PlacentaeOpen Targets
0.10Weak
brain cancerOpen Targets
0.07Suggestive
hepatitis B virus infectionOpen Targets
0.07Suggestive
hypertensionOpen Targets
0.06Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
RPS4Y1Shared pathway100%RPS4Y2Shared pathway100%IWS1Protein interaction95%HARS1Shared pathway50%RARS1Shared pathway50%ABCF1Shared pathway50%
Tissue Expression6 tissues
Heart
100%
Bone Marrow
83%
Lung
70%
Brain
63%
Liver
60%
Ovary
57%
Gene Interaction Network
Click a node to explore
SRBD1RPS4Y1RPS4Y2IWS1HARS1RARS1ABCF1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q8N5C6
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.87LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.72 [0.60–0.87]
RankingsWhere SRBD1 stands among ~20K protein-coding genes
  • #6,766of 20,598
    Most Researched70
  • #7,695of 17,882
    Most Constrained (LOEUF)0.87
Genes detectedSRBD1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
SRBD1 facilitates chromosome segregation by promoting topoisomerase IIα localization to mitotic chromosomes.
PMID: 39955279
Nat Commun · 2025
1.00
2
SRBD1, a highly conserved gene required for chromosome individualization.
PMID: 40106440
Cell Rep · 2025
0.90
3
Dogs and humans share a common susceptibility gene SRBD1 for glaucoma risk.
PMID: 24040232
PLoS One · 2013
0.80
4
Association between SRBD1 and ELOVL5 gene polymorphisms and primary open-angle glaucoma.
PMID: 21508110
Invest Ophthalmol Vis Sci · 2011
0.70
5
Selective Autophagy Receptor NBR1 Retards Nucleus Pulposus Cell Senescence by Directing the Clearance of SRBD1.
PMID: 38169523
Int J Biol Sci · 2024
0.60