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GeneE
7 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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RTF2
replication termination factor 2
Chromosome 20 · 20q13.31
NCBI Gene: 51507Ensembl: ENSG00000022277.13HGNC: HGNC:15890UniProt: A0A0A0MQR2
50PubMed Papers
18Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
DNA bindingprotein bindingcellular response to hydroxyurearegulation of DNA stabilityCOVID-19severe acute respiratory syndromeinfectionsubarachnoid hemorrhage
✦AI Summary

RTF2 (replication termination factor 2) is a nuclear replisome component that plays dual roles in DNA replication stress response and viral restriction. Mechanistically, RTF2 associates with stalled replication forks and must be removed by proteasomal shuttle proteins DDI1 and DDI2 to enable optimal fork restart 1. Persistence of RTF2 at stalled forks impairs restart, leading to hyperactivated DNA damage signaling, ssDNA accumulation, and chromosome 20 1. RTF2 is also required for correct mRNA splicing of replication fork barrier proteins, potentially through interactions with splicing machinery 2. Beyond DNA replication, RTF2 functions as a nuclear-localized interferon-induced restriction factor that inhibits influenza virus primary transcription and promotes antiviral effector expression, with RTF2 loss enhancing viral replication 3. This protein is essential for cellular responses to replication stress agents like hydroxyurea 4. RTF2's clinical significance derives from its roles in maintaining genome integrity under replication stress—a hallmark of cancer and aging—and in innate antiviral immunity. Understanding RTF2 regulation may inform therapeutic strategies for replication stress-related diseases and viral infections.

Sources cited
1
RTF2 removal from stalled forks is required for optimal fork restart; persistence of RTF2 causes fork restart defects, hyperactivated DNA damage signaling, ssDNA accumulation, and chromosome instability
PMID: 29290612
2
RTF2 is physically associated with mRNA processing and splicing factors; rtf2 deletion causes increased intron retention including in rtf1 transcript
PMID: 37615341
3
RTF2 is a nuclear-localized interferon-induced factor that restricts influenza virus replication by inhibiting primary transcription and promoting antiviral effector expression
PMID: 32878895
4
RTF2 is involved in cellular response to DNA replication stress caused by hydroxyurea
PMID: 31276951
⚠Limited data available — This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ18
COVID-19Open Targets
0.26Weak
severe acute respiratory syndromeOpen Targets
0.26Weak
infectionOpen Targets
0.04Suggestive
subarachnoid hemorrhageOpen Targets
0.03Suggestive
systemic juvenile idiopathic arthritisOpen Targets
0.01Suggestive
Alzheimer diseaseOpen Targets
0.01Suggestive
esophageal squamous cell carcinomaOpen Targets
0.00Suggestive
viral diseaseOpen Targets
0.00Suggestive
acute monocytic leukemiaOpen Targets
0.00Suggestive
influenzaOpen Targets
0.00Suggestive
melanomaOpen Targets
0.00Suggestive
cervical cancerOpen Targets
0.00Suggestive
colon adenocarcinomaOpen Targets
0.00Suggestive
colorectal adenocarcinomaOpen Targets
0.00Suggestive
gastric cancerOpen Targets
0.00Suggestive
lung cancerOpen Targets
0.00Suggestive
ovarian serous cystadenocarcinomaOpen Targets
0.00Suggestive
thyroid cancer, nonmedullary, 1Open Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TRMT1Protein interaction84%RTF1Protein interaction77%DDI1Shared pathway25%DDI2Shared pathway20%SPIDRShared pathway14%NSMCE3Shared pathway13%
Tissue Expression6 tissues
Brain
100%
Heart
65%
Bone Marrow
61%
Lung
50%
Ovary
46%
Liver
38%
Gene Interaction Network
Click a node to explore
RTF2TRMT1RTF1DDI1DDI2SPIDRNSMCE3
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9BY42
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.81LoF Tolerant
pLIⓘ
0.01Tolerant
Observed/Expected LoF0.53 [0.36–0.81]
RankingsWhere RTF2 stands among ~20K protein-coding genes
  • #8,869of 20,598
    Most Researched50
  • #6,742of 17,882
    Most Constrained (LOEUF)0.81
Genes detectedRTF2
Sources retrieved7 papers
Response time—
📄 Sources
7▼
1
PMID: 37615341
Elife · 2023
1.00
2
Loss of the Nuclear Protein RTF2 Enhances Influenza Virus Replication.
PMID: 32878895
J Virol · 2020
0.86
3
The yeast proteases Ddi1 and Wss1 are both involved in the DNA replication stress response.
PMID: 31276951
DNA Repair (Amst) · 2019
0.71
4
Medical and Economic Advantages of Postoperative Blood Salvage in Total Knee Replacement.
PMID: 27053392
Ortop Traumatol Rehabil · 2015
0.57
5
Removal of RTF2 from Stalled Replisomes Promotes Maintenance of Genome Integrity.
PMID: 29290612
Mol Cell · 2018
0.43