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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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RTN3
reticulon 3
Chromosome 11 · 11q13.1
NCBI Gene: 10313Ensembl: ENSG00000133318.15HGNC: HGNC:10469UniProt: O95197
146PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
endoplasmic reticulum membranereticulophagyendoplasmic reticulum tubular network organizationGolgi apparatusdengue diseaseneurodegenerative diseasechronic kidney diseaseAlzheimer disease
✦AI Summary

RTN3 (reticulon 3) is an endoplasmic reticulum (ER) membrane protein that plays crucial roles in ER tubular network formation and cellular quality control mechanisms 1. The protein shapes tubular ER structures and participates in reticulophagy, a selective autophagy process that degrades ER components 23. RTN3 functions in organelle-specific autophagy pathways that are beneficial for inflammatory disorders by eliminating damaged organelles and maintaining cellular homeostasis 1. In disease contexts, RTN3 demonstrates tissue-specific effects: increased expression contributes to nonalcoholic fatty liver disease by inhibiting the AMPK-IDH2 pathway and causing mitochondrial dysfunction 4, while RTN3 interacts with BACE1 to modulate amyloid-β formation in Alzheimer's disease pathogenesis 5. Conversely, RTN3 deficiency exacerbates cisplatin-induced acute kidney injury through disruption of mitochondrial stability via the RTN3-HSPA9-VDAC2 complex 6. RTN3 also participates in unconventional protein secretion during cellular stress, forming ER tubular bodies that facilitate Golgi-independent trafficking 3. Additionally, RTN3 is involved in viral replication processes and can be targeted by tumor-derived exosomal miRNAs to promote macrophage M2 polarization in cancer metastasis 7.

Sources cited
1
RTN3 participates in reticulophagy and organelle-specific autophagy for quality control
PMID: 32048886
2
Reticulophagy serves as antiviral defense and RTN3 is involved in viral-host interactions
PMID: 39394962
3
RTN3L shapes ER tubular structures and participates in stress-induced unconventional protein secretion
PMID: 39919755
4
Increased RTN3 causes fatty liver disease by inhibiting AMPK-IDH2 pathway and mitochondrial dysfunction
PMID: 36925557
5
RTN3 interacts with BACE1 to modulate amyloid-β formation in Alzheimer's disease
PMID: 27883331
6
RTN3 deficiency exacerbates kidney injury through disruption of mitochondrial stability via HSPA9-VDAC2 complex
PMID: 38336146
7
RTN3 is targeted by tumor exosomal miRNAs to promote macrophage polarization in cancer metastasis
PMID: 38904015
Disease Associationsⓘ20
dengue diseaseOpen Targets
0.39Weak
neurodegenerative diseaseOpen Targets
0.37Weak
chronic kidney diseaseOpen Targets
0.09Suggestive
Alzheimer diseaseOpen Targets
0.09Suggestive
infectionOpen Targets
0.08Suggestive
non-alcoholic fatty liver diseaseOpen Targets
0.08Suggestive
myocardial infarctionOpen Targets
0.07Suggestive
pulmonary fibrosisOpen Targets
0.07Suggestive
familial idiopathic steroid-resistant nephrotic syndromeOpen Targets
0.07Suggestive
nephrotic syndromeOpen Targets
0.07Suggestive
focal segmental glomerulosclerosisOpen Targets
0.07Suggestive
renal fibrosisOpen Targets
0.06Suggestive
familial juvenile hyperuricemic nephropathy type 1Open Targets
0.06Suggestive
Hyperuricemia - anemia - renal failureOpen Targets
0.06Suggestive
Dent diseaseOpen Targets
0.06Suggestive
nephrotic syndrome, type 24Open Targets
0.05Suggestive
hepatocellular carcinomaOpen Targets
0.05Suggestive
familial juvenile hyperuricemic nephropathy type 2Open Targets
0.05Suggestive
karyomegalic interstitial nephritisOpen Targets
0.05Suggestive
Dent disease type 1Open Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
REEP5Protein interaction99%BACE1Protein interaction99%GABARAPProtein interaction96%GABARAPL1Protein interaction95%BACE2Protein interaction91%ATL1Protein interaction83%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
12%
Lung
9%
Heart
7%
Liver
7%
Ovary
5%
Gene Interaction Network
Click a node to explore
RTN3REEP5BACE1GABARAPGABARAPL1BACE2ATL1
PROTEIN STRUCTURE
Preparing viewer…
PDB7BRU · 2.15 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.71LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.55 [0.42–0.71]
RankingsWhere RTN3 stands among ~20K protein-coding genes
  • #3,118of 20,598
    Most Researched146 · top quartile
  • #5,465of 17,882
    Most Constrained (LOEUF)0.71
Genes detectedRTN3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Reticulophagy and viral infection.
PMID: 39394962
Autophagy · 2025
1.00
2
Organelle-specific autophagy in inflammatory diseases: a potential therapeutic target underlying the quality control of multiple organelles.
PMID: 32048886
Autophagy · 2021
0.90
3
Increased RTN3 phenocopies nonalcoholic fatty liver disease by inhibiting the AMPK-IDH2 pathway.
PMID: 36925557
MedComm (2020) · 2023
0.80
4
Impaired autophagy and APP processing in Alzheimer's disease: The potential role of Beclin 1 interactome.
PMID: 23827971
Prog Neurobiol · 2013
0.70
5
Hypoxic tumor-derived exosomal miR-4488 induces macrophage M2 polarization to promote liver metastasis of pancreatic neuroendocrine neoplasm through RTN3/FABP5 mediated fatty acid oxidation.
PMID: 38904015
Int J Biol Sci · 2024
0.60