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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SCN2B
sodium voltage-gated channel beta subunit 2
Chromosome 11 · 11q23.3
NCBI Gene: 6327Ensembl: ENSG00000149575.9HGNC: HGNC:10589UniProt: O60939
36PubMed Papers
21Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
CLINICAL
OMIM Disease Gene
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
cardiac muscle cell action potential involved in contractionmembrane depolarization during action potentialmembrane depolarization during cardiac muscle cell action potentialregulation of heart rate by cardiac conductionfamilial atrial fibrillationBrugada syndromeAbruptio Placentaeplacenta praevia
✦AI Summary

SCN2B encodes the β2 subunit of voltage-gated sodium channels (VGSCs), serving as a regulatory component that modulates channel trafficking, localization, and biophysical properties 1. The β2 subunit promotes cell surface expression of sodium channel α subunits and is essential for proper channel function in excitable tissues 1. In cardiac tissue, SCN2B plays critical roles in establishing normal electrical activity, with deletion studies in mice demonstrating reduced sodium and potassium current densities in ventricular myocytes and conduction slowing in the right ventricular outflow tract 2. Loss of SCN2B function results in both ventricular and atrial arrhythmias, with increased susceptibility to atrial fibrillation, elevated fibrosis levels, and higher repolarization dispersion 2. The protein's primary mechanism involves chaperoning voltage-gated sodium channel α-subunits to the plasma membrane, similar to its neuronal function 2. Clinically, SCN2B variants are associated with cardiac arrhythmias including atrial fibrillation and have been implicated in Brugada syndrome 2. Polymorphisms in SCN2B show associations with epilepsy risk, particularly idiopathic epilepsy 3. The gene has also been identified as a potential biomarker in HIV-associated encephalitis and myocardial bridging 45.

Sources cited
1
SCN2B encodes β2 subunit that regulates sodium channel trafficking, localization, and biophysical properties
PMID: 31614896
2
SCN2B deletion in mice causes ventricular and atrial arrhythmias, reduced current densities, and conduction abnormalities
PMID: 27932425
3
SCN2B polymorphisms are associated with epilepsy risk, particularly idiopathic epilepsy
PMID: 24337656
4
SCN2B identified as hub gene and potential biomarker in HIV-associated encephalitis
PMID: 37891420
5
SCN2B variants associated with myocardial bridging development
PMID: 38136997
Disease Associationsⓘ21
familial atrial fibrillationOpen Targets
0.61Moderate
Brugada syndromeOpen Targets
0.37Weak
Abruptio PlacentaeOpen Targets
0.25Weak
placenta praeviaOpen Targets
0.24Weak
hidradenitisOpen Targets
0.22Weak
Abnormality of the cardiovascular systemOpen Targets
0.19Weak
dilated cardiomyopathyOpen Targets
0.12Weak
MODYOpen Targets
0.11Weak
type 1 diabetes mellitusOpen Targets
0.10Suggestive
maturity-onset diabetes of the young type 2Open Targets
0.07Suggestive
maturity-onset diabetes of the young type 4Open Targets
0.07Suggestive
maturity-onset diabetes of the young type 6Open Targets
0.07Suggestive
self-limited childhood occipital epilepsyOpen Targets
0.07Suggestive
diabetes mellitus, transient neonatal, 2Open Targets
0.07Suggestive
benign adult familial myoclonic epilepsyOpen Targets
0.06Suggestive
maturity-onset diabetes of the young type 3Open Targets
0.06Suggestive
type 2 diabetes mellitusOpen Targets
0.05Suggestive
maturity-onset diabetes of the young type 10Open Targets
0.05Suggestive
diabetes mellitusOpen Targets
0.05Suggestive
nodular neuronal heterotopiaOpen Targets
0.05Suggestive
Atrial fibrillation, familial, 14UniProt
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SCN2AProtein interaction88%TRPM4Protein interaction88%CACNA1GProtein interaction85%SCN11AProtein interaction81%SCNN1AProtein interaction78%NAV1Protein interaction77%
Tissue Expression6 tissues
Heart
100%
Brain
69%
Ovary
3%
Lung
2%
Liver
0%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
SCN2BSCN2ATRPM4CACNA1GSCN11ASCNN1ANAV1
PROTEIN STRUCTURE
Preparing viewer…
PDB5FEB · 1.35 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.15LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.74 [0.48–1.15]
RankingsWhere SCN2B stands among ~20K protein-coding genes
  • #10,857of 20,598
    Most Researched36
  • #11,982of 17,882
    Most Constrained (LOEUF)1.15
Genes detectedSCN2B
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
SCN1B and SCN2B gene variants analysis in dravet syndrome patients: Analysis of 22 cases.
PMID: 30921204
Medicine (Baltimore) · 2019
1.00
2
Case-control association study of polymorphisms in the voltage-gated sodium channel genes SCN1A, SCN2A, SCN3A, SCN1B, and SCN2B and epilepsy.
PMID: 24337656
Hum Genet · 2014
0.90
3
Scn2b Deletion in Mice Results in Ventricular and Atrial Arrhythmias.
PMID: 27932425
Circ Arrhythm Electrophysiol · 2016
0.80
4
Structural variants involving MLLT10 fusion are associated with adverse outcomes in pediatric acute myeloid leukemia.
PMID: 38306602
Blood Adv · 2024
0.70
5
Comprehensive analyses identify potential biomarkers for encephalitis in HIV infection.
PMID: 37891420
Sci Rep · 2023
0.60