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25 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SDCBP
syndecan binding protein
Chromosome 8 · 8q12.1
NCBI Gene: 6386Ensembl: ENSG00000137575.12HGNC: HGNC:10662UniProt: B4DHN5
220PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
RESEARCH IMPACT
Trending
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
frizzled bindingnegative regulation of receptor internalizationregulation of mitotic cell cyclepositive regulation of cell population proliferationhead and neck squamous cell carcinomaAbnormality of the skeletal systemneurodegenerative diseaseneoplasm
✦AI Summary

SDCBP (syndecan binding protein), also known as syntenin-1 or MDA-9, is a multifunctional PDZ domain-containing adapter protein with diverse cellular roles 1. Primary functions include regulation of transmembrane protein trafficking, exosome biogenesis, and modulation of TGF-β signaling. SDCBP positively regulates TGFB1-mediated SMAD2/3 activation and epithelial-to-mesenchymal transition by enhancing TGFR1 cell-surface expression 2. It coordinates with SDC1/4 and PDCD6IP to regulate exosome biogenesis 3 and is consistently abundant in exosomes across multiple cell types, making it a putative universal biomarker 4. In cancer contexts, SDCBP promotes proliferation and metastasis across multiple tumor types 5. In pancreatic ductal adenocarcinoma, SDCBP inhibits YAP1 phosphorylation and proteasomal degradation, promoting tumor progression 6. In triple-negative breast cancer, SDCBP stabilizes BACH1 by disassembling SCF ubiquitin ligase complexes, enhancing metastatic gene expression 7. SDCBP also functions in immune regulation, with elevated expression identified as a diagnostic biomarker in asthma pathogenesis 8. Therapeutically, zinc pyrithione suppresses SDCBP-mediated PDAC progression, and SDCBP inhibition sensitizes cancer cells to combination therapies, positioning it as a promising therapeutic target across multiple malignancies.

Sources cited
1
SDCBP is a PDZ domain-containing scaffolding protein with diverse functions in membrane trafficking, cell adhesion, neural development, ubiquitination, and exosome biogenesis
PMID: 26291527
2
SDCBP enhances TGFR1 cell-surface expression by preventing interaction with CAV1, thereby promoting TGFB1-mediated SMAD2/3 activation and EMT
PMID: 25893292
3
SDCBP regulates exosome biogenesis in concert with SDC1/4 and PDCD6IP
PMID: 22660413
4
Syntenin-1 (SDCBP) is the highest abundant protein in exosomes across different cell types and species, serving as a putative universal exosome biomarker
PMID: 34108659
5
SDCBP/MDA-9 promotes metastasis across multiple cancer types and is a major contributor to metastatic spread
PMID: 32061839
6
SDCBP promotes pancreatic cancer progression by preventing YAP1 proteasomal degradation via interaction with YAP1's TAD domain, and zinc pyrithione suppresses this pathway
PMID: 36828627
7
SDCBP stabilizes BACH1 in triple-negative breast cancer by disassembling SCF ubiquitin ligase complexes via its PDZ1 domain
PMID: 40263598
8
SDCBP is identified as a hub anoikis-related biomarker significantly upregulated in asthma with diagnostic and therapeutic potential
PMID: 40634444
Disease Associationsⓘ20
head and neck squamous cell carcinomaOpen Targets
0.39Weak
Abnormality of the skeletal systemOpen Targets
0.24Weak
neurodegenerative diseaseOpen Targets
0.24Weak
neoplasmOpen Targets
0.11Weak
melanomaOpen Targets
0.11Weak
gliomaOpen Targets
0.10Suggestive
cholelithiasisOpen Targets
0.10Suggestive
lung cancerOpen Targets
0.09Suggestive
triple-negative breast cancerOpen Targets
0.09Suggestive
breast cancerOpen Targets
0.09Suggestive
gallstonesOpen Targets
0.08Suggestive
acute myeloid leukemiaOpen Targets
0.08Suggestive
CholecystitisOpen Targets
0.08Suggestive
metabolic diseaseOpen Targets
0.08Suggestive
HypercholesterolemiaOpen Targets
0.08Suggestive
non-small cell lung carcinomaOpen Targets
0.08Suggestive
pachyonychia congenitaOpen Targets
0.08Suggestive
small cell lung carcinomaOpen Targets
0.08Suggestive
Uveal MelanomaOpen Targets
0.08Suggestive
cancerOpen Targets
0.08Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
KARS1Protein interaction100%QARS1Protein interaction100%AIMP1Protein interaction100%EEF1E1Protein interaction100%EPRS1Protein interaction100%PDCD6IPProtein interaction100%
Tissue Expression6 tissues
Lung
100%
Bone Marrow
78%
Brain
71%
Heart
48%
Ovary
39%
Liver
32%
Gene Interaction Network
Click a node to explore
SDCBPKARS1QARS1AIMP1EEF1E1EPRS1PDCD6IP
PROTEIN STRUCTURE
Preparing viewer…
PDB1R6J · 0.73 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
1.09LoF Tolerant
pLIⓘ
0.06Tolerant
Observed/Expected LoF0.55 [0.30–1.09]
RankingsWhere SDCBP stands among ~20K protein-coding genes
  • #1,872of 20,598
    Most Researched220 · top 10%
  • #11,097of 17,882
    Most Constrained (LOEUF)1.09
Genes detectedSDCBP
Sources retrieved25 papers
Response time—
📄 Sources
25▼
1
SDCBP promotes pancreatic cancer progression by preventing YAP1 from β-TrCP-mediated proteasomal degradation.
PMID: 36828627
Gut · 2023
1.00
2
MDA-9/Syntenin (SDCBP): Novel gene and therapeutic target for cancer metastasis.
PMID: 32061839
Pharmacol Res · 2020
0.90
3
Quantitative proteomics identifies the core proteome of exosomes with syntenin-1 as the highest abundant protein and a putative universal biomarker.
PMID: 34108659
Nat Cell Biol · 2021
0.80
4
Proteomic dissection of large extracellular vesicle surfaceome unravels interactive surface platform.
PMID: 34817906
J Extracell Vesicles · 2021
0.70
5
Identification of multicohort-based predictive signature for NMIBC recurrence reveals SDCBP as a novel oncogene in bladder cancer.
PMID: 39873429
Ann Med · 2025
0.64