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GeneE
2 sources retrieved Β· Most recent: April 2026 Β· Index updated 15 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
SEL1L2
SEL1L2 adaptor subunit of SYVN1 ubiquitin ligase
Chromosome 20 Β· 20p12.1
NCBI Gene: 80343Ensembl: ENSG00000101251.13HGNC: HGNC:15897UniProt: A0A2R8YF92
10PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
ciliumnuclear speckERAD pathwayendoplasmic reticulum membranealcohol drinkingresponse to antihypertensive drugbenign prostatic hyperplasiaAbnormal urine output
✦AI Summary

Based on limited published evidence, SEL1L2 functions as an adaptor subunit of the SYVN1 ubiquitin ligase complex involved in ER-associated degradation (ERAD). GO annotations localize SEL1L2 to the endoplasmic reticulum membrane, nuclear speck, and cilium. A de novo SEL1L2 truncation variant was identified in an NDD patient with trigonocephaly 1, suggesting potential involvement in neurodevelopmental disorders. Additionally, a DMR located between MACROD2/SEL1L2 genes showed association with BMI through gut microbiota-mediated epigenetic regulation 2, indicating possible metabolic relevance. However, direct functional characterization of SEL1L2 remains limited.

Sources cited
1
De novo SEL1L2 truncation variant identified in NDD patient with trigonocephaly, proposed as novel candidate gene for neurodevelopmental disorders
PMID: 32530565
2
DMR between MACROD2/SEL1L2 associated with BMI and regulated by gut microbiota abundance in obesity
PMID: 37049393
⚠Limited data available β€” This gene has 2 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜20
alcohol drinkingOpen Targets
0.34Weak
response to antihypertensive drugOpen Targets
0.30Weak
benign prostatic hyperplasiaOpen Targets
0.29Weak
Abnormal urine outputOpen Targets
0.28Weak
JaundiceOpen Targets
0.25Weak
urinary system diseaseOpen Targets
0.19Weak
neurodegenerative diseaseOpen Targets
0.19Weak
male reproductive organ cancerOpen Targets
0.17Weak
dislocationOpen Targets
0.16Weak
ovarian dysfunctionOpen Targets
0.07Suggestive
Follicular CystOpen Targets
0.06Suggestive
goutOpen Targets
0.06Suggestive
chondrocalcinosisOpen Targets
0.03Suggestive
femur fractureOpen Targets
0.03Suggestive
ovarian carcinomaOpen Targets
0.02Suggestive
Abruptio PlacentaeOpen Targets
0.02Suggestive
Alzheimer diseaseOpen Targets
0.02Suggestive
Neurodevelopmental delayOpen Targets
0.01Suggestive
Netherton syndromeOpen Targets
0.00Suggestive
breast ductal carcinoma in situOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar β†—
Related Genes
UBXN4Shared pathway100%FAM8A1Shared pathway100%RNF121Shared pathway100%TMUB2Shared pathway100%FOXRED2Shared pathway100%RNF175Shared pathway100%
Tissue Expression6 tissues
Heart
100%
Ovary
82%
Bone Marrow
53%
Brain
24%
Lung
12%
Liver
0%
Gene Interaction Network
Click a node to explore
SEL1L2UBXN4FAM8A1RNF121TMUB2FOXRED2RNF175
PROTEIN STRUCTURE
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AlphaFoldAI-predicted Β· UniProt Q5TEA6
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.98LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.75 [0.58–0.98]
RankingsWhere SEL1L2 stands among ~20K protein-coding genes
  • #17,170of 20,598
    Most Researched10
  • #9,336of 17,882
    Most Constrained (LOEUF)0.98
Genes detectedSEL1L2
Sources retrieved2 papers
Response timeβ€”
πŸ“„ Sources
2
1
A recurrent PJA1 variant in trigonocephaly and neurodevelopmental disorders.
PMID: 32530565
Ann Clin Transl Neurol Β· 2020
1.00
2
Crosstalk between Gut Microbiota and Epigenetic Markers in Obesity Development: Relationship between
PMID: 37049393
Nutrients Β· 2023
0.50