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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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SEMA4D
semaphorin 4D
Chromosome 9 · 9q22.2
NCBI Gene: 10507Ensembl: ENSG00000187764.12HGNC: HGNC:10732UniProt: E9PFD9
139PubMed Papers
20Diseases
1Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Receptor
CLINICAL
Clinical Trials
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
transmembrane signaling receptor activitysignaling receptor bindingprotein bindingsemaphorin receptor bindingskin agingsclerosing cholangitisintelligenceAbruptio Placentae
✦AI Summary

SEMA4D (semaphorin 4D) is a transmembrane signaling molecule that functions as a key mediator of cell-cell communication across multiple biological systems. The protein serves as a ligand for plexin receptors, particularly PLXNB1 and PLXNB2, to regulate diverse cellular processes. In the nervous system, SEMA4D controls microglial-astrocyte interactions during neuroinflammation, where microglia-expressed SEMA4D activates astrocytes via PlexinB2 to promote pathological responses in experimental autoimmune encephalomyelitis 1. The protein also regulates transcription of inflammatory genes including STAT3, CCL5, and IRF1 in activated microglia during autoimmune uveitis 2. In vascular biology, SEMA4D/PlexinB1 signaling induces endothelial dysfunction and contributes to diabetic retinopathy pathogenesis, with soluble SEMA4D levels correlating with poor anti-VEGF treatment response 3. Additionally, SEMA4D promotes choroidal neovascularization in age-related macular degeneration through CD8+ T cell-pericyte interactions 4. In cardiovascular disease, osteoclast-derived SEMA4D drives sympathetic hyperinnervation, promoting vascular smooth muscle cell phenotypic switching and abdominal aortic aneurysm development 5. SEMA4D also serves as a biomarker for hepatic fibrosis in metabolic dysfunction-associated steatotic liver disease 6 and facilitates osteoblast-osteoclast communication in bone remodeling 7.

Sources cited
1
SEMA4D expressed in microglia controls astrocyte responses via PlexinB2 in CNS inflammation
PMID: 33888612
2
YY1 lactylation regulates SEMA4D transcription among other inflammatory genes in activated microglia
PMID: 38493498
3
SEMA4D/PlexinB1 signaling induces endothelial dysfunction in diabetic retinopathy and soluble SEMA4D correlates with anti-VEGF treatment response
PMID: 31943789
4
SEMA4D on CD8+ T cells interacts with PlexinB1 on pericytes to promote neovascularization in AMD
PMID: 40121188
5
Osteoclast-derived SEMA4D induces sympathetic hyperinnervation and promotes AAA development through VSMC phenotypic switching
PMID: 38821358
6
SEMA4D serves as a blood-based biomarker for hepatic fibrosis in MASLD
PMID: 38811591
7
SEMA4D is involved in osteoblast-osteoclast communication during bone remodeling
PMID: 32927921
Disease Associationsⓘ20
skin agingOpen Targets
0.43Moderate
sclerosing cholangitisOpen Targets
0.37Weak
intelligenceOpen Targets
0.32Weak
Abruptio PlacentaeOpen Targets
0.26Weak
otosclerosisOpen Targets
0.21Weak
neoplasmOpen Targets
0.13Weak
Huntington diseaseOpen Targets
0.11Weak
head and neck squamous cell carcinomaOpen Targets
0.10Weak
rheumatoid arthritisOpen Targets
0.10Suggestive
acute myeloid leukemiaOpen Targets
0.09Suggestive
acute lymphoblastic leukemiaOpen Targets
0.09Suggestive
colorectal carcinomaOpen Targets
0.09Suggestive
melanomaOpen Targets
0.09Suggestive
Mobius syndromeOpen Targets
0.09Suggestive
Alzheimer diseaseOpen Targets
0.08Suggestive
urinary bladder carcinomaOpen Targets
0.08Suggestive
leukemiaOpen Targets
0.08Suggestive
Duane retraction syndromeOpen Targets
0.08Suggestive
achalasia-alacrima syndromeOpen Targets
0.07Suggestive
gastric carcinomaOpen Targets
0.07Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Drug Targets1
PEPINEMABPhase II
Semaphorin-4D inhibitor
Huntington disease
Related Genes
CD72Protein interaction100%PTPRCProtein interaction98%ARHGEF11Protein interaction96%RND1Protein interaction94%ARHGEF12Protein interaction93%RHOAProtein interaction93%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
65%
Lung
30%
Heart
18%
Ovary
16%
Liver
8%
Gene Interaction Network
Click a node to explore
SEMA4DCD72PTPRCARHGEF11RND1ARHGEF12RHOA
PROTEIN STRUCTURE
Preparing viewer…
PDB1OLZ · 2.00 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.45Moderately Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.31 [0.22–0.45]
RankingsWhere SEMA4D stands among ~20K protein-coding genes
  • #3,322of 20,598
    Most Researched139 · top quartile
  • #2,542of 17,882
    Most Constrained (LOEUF)0.45 · top quartile
Genes detectedSEMA4D
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Osteoblast-Osteoclast Communication and Bone Homeostasis.
PMID: 32927921
Cells · 2020
1.00
2
YY1 Lactylation Aggravates Autoimmune Uveitis by Enhancing Microglial Functions via Inflammatory Genes.
PMID: 38493498
Adv Sci (Weinh) · 2024
0.90
3
Barcoded viral tracing of single-cell interactions in central nervous system inflammation.
PMID: 33888612
Science · 2021
0.80
4
Inhibition of Sema4D/PlexinB1 signaling alleviates vascular dysfunction in diabetic retinopathy.
PMID: 31943789
EMBO Mol Med · 2020
0.70
5
A genome-wide association meta-analysis of all-cause and vascular dementia.
PMID: 39046104
Alzheimers Dement · 2024
0.60