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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
SGCA
sarcoglycan alpha
Chromosome 17 Β· 17q21.33
NCBI Gene: 6442Ensembl: ENSG00000108823.18HGNC: HGNC:10805UniProt: A0A0S2Z4P8
52PubMed Papers
21Diseases
0Drugs
186Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingsarcoglycan complexcamera-type eye developmentGolgi membraneautosomal recessive limb-girdle muscular dystrophy type 2Dautosomal recessive limb-girdle muscular dystrophyAbnormality of the musculaturesarcoglycanopathy
✦AI Summary

SGCA encodes alpha-sarcoglycan, a critical component of the sarcoglycan complex within the dystrophin-glycoprotein complex (DGC) that provides mechanical support to muscle sarcolemma during fiber contraction 1. The DGC acts as a linker between the muscle fiber cytoskeleton and extracellular matrix, maintaining sarcolemma integrity during muscle contraction 1. Mutations in SGCA cause LGMDR3 (limb-girdle muscular dystrophy type R3), one of the most severe forms of autosomal recessive limb-girdle muscular dystrophies 1. LGMDR3 typically presents in the first decade of life with muscle hypertrophy, elevated creatine kinase, variable muscle weakness, and progressive loss of ambulation 1. In a large European cohort, SGCA mutations accounted for 159 of 396 sarcoglycanopathy cases, with patients showing later onset and slower disease progression compared to other sarcoglycanopathy subtypes 2. Common pathogenic variants include c.229C>T, c.739G>A, and c.850C>T, found in 60% of LGMDR3 patients 2. Clinical significance includes the identification of early symptom onset (before age 10) and low residual protein expression (<30%) as risk factors for early loss of ambulation 2. Gene therapy approaches using adeno-associated virus vectors for sarcoglycan replacement are under development 1.

Sources cited
1
SGCA encodes alpha-sarcoglycan as part of the dystrophin-glycoprotein complex and causes LGMDR3 with typical clinical features
PMID: 34404573
2
Large European cohort data showing LGMDR3 prevalence, common mutations, and genotype-phenotype correlations
PMID: 32875335
3
Gene therapy approaches using AAV vectors are under development for sarcoglycanopathies
PMID: 34404573
⚠Limited data available β€” This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜21
autosomal recessive limb-girdle muscular dystrophy type 2DOpen Targets
0.84Strong
autosomal recessive limb-girdle muscular dystrophyOpen Targets
0.66Moderate
Abnormality of the musculatureOpen Targets
0.50Moderate
sarcoglycanopathyOpen Targets
0.49Moderate
limb-girdle muscular dystrophyOpen Targets
0.46Moderate
muscular dystrophyOpen Targets
0.43Moderate
genetic disorderOpen Targets
0.34Weak
Elevated circulating creatine kinase concentrationOpen Targets
0.13Weak
qualitative or quantitative defects of alpha-sarcoglycanOpen Targets
0.12Weak
Alzheimer diseaseOpen Targets
0.12Weak
isolated asymptomatic elevation of creatine phosphokinaseOpen Targets
0.11Weak
Proximal muscle weaknessOpen Targets
0.11Weak
Emery-Dreifuss muscular dystrophyOpen Targets
0.07Suggestive
autosomal recessive limb-girdle muscular dystrophy type 2EOpen Targets
0.07Suggestive
autosomal recessive limb-girdle muscular dystrophy type 2LOpen Targets
0.07Suggestive
Distal myopathy, Nonaka typeOpen Targets
0.07Suggestive
Becker muscular dystrophyOpen Targets
0.07Suggestive
Distal myotilinopathyOpen Targets
0.07Suggestive
tibial muscular dystrophyOpen Targets
0.07Suggestive
myofibrillar myopathy 3Open Targets
0.07Suggestive
Muscular dystrophy, limb-girdle, autosomal recessive 3UniProt
Pathogenic Variants186
NM_000023.4(SGCA):c.402C>G (p.Tyr134Ter)Pathogenic
Autosomal recessive limb-girdle muscular dystrophy type 2D|not provided|Autosomal recessive limb-girdle muscular dystrophy
β˜…β˜…β˜…β˜†2025β†’ Residue 134
NM_000023.4(SGCA):c.661C>T (p.Arg221Cys)Likely pathogenic
not provided|Autosomal recessive limb-girdle muscular dystrophy type 2D|Autosomal recessive limb-girdle muscular dystrophy
β˜…β˜…β˜…β˜†2025β†’ Residue 221
NM_000023.4(SGCA):c.100C>T (p.Arg34Cys)Likely pathogenic
Autosomal recessive limb-girdle muscular dystrophy type 2D|not provided|Autosomal recessive limb-girdle muscular dystrophy
β˜…β˜…β˜…β˜†2025β†’ Residue 34
NM_000023.4(SGCA):c.850C>T (p.Arg284Cys)Pathogenic
Autosomal recessive limb-girdle muscular dystrophy type 2D|not provided|Sarcoglycanopathy|Autosomal recessive limb-girdle muscular dystrophy
β˜…β˜…β˜…β˜†2025β†’ Residue 284
NM_000023.4(SGCA):c.241C>T (p.Arg81Cys)Likely pathogenic
not provided|Autosomal recessive limb-girdle muscular dystrophy type 2D|Autosomal recessive limb-girdle muscular dystrophy|SGCA-related disorder
β˜…β˜…β˜…β˜†2025β†’ Residue 81
NM_000023.4(SGCA):c.101G>A (p.Arg34His)Likely pathogenic
not provided|Autosomal recessive limb-girdle muscular dystrophy type 2D|Autosomal recessive limb-girdle muscular dystrophy
β˜…β˜…β˜…β˜†2025β†’ Residue 34
NM_000023.4(SGCA):c.229C>T (p.Arg77Cys)Pathogenic
Autosomal recessive limb-girdle muscular dystrophy type 2D|not provided|Sarcoglycanopathy|Abnormality of the musculature|Autosomal recessive limb-girdle muscular dystrophy|Limb-girdle muscular dystrophy
β˜…β˜…β˜…β˜†2025β†’ Residue 77
NM_000023.4(SGCA):c.957-11C>GLikely pathogenic
Autosomal recessive limb-girdle muscular dystrophy type 2D|not provided|Autosomal recessive limb-girdle muscular dystrophy|Inborn genetic diseases
β˜…β˜…β˜…β˜†2025
NM_000023.4(SGCA):c.662G>C (p.Arg221Pro)Likely pathogenic
not provided|Autosomal recessive limb-girdle muscular dystrophy type 2D|Autosomal recessive limb-girdle muscular dystrophy
β˜…β˜…β˜…β˜†2025β†’ Residue 221
NM_000023.4(SGCA):c.700G>A (p.Asp234Asn)Likely pathogenic
Autosomal recessive limb-girdle muscular dystrophy type 2D|not provided|Autosomal recessive limb-girdle muscular dystrophy
β˜…β˜…β˜…β˜†2025β†’ Residue 234
NM_000023.4(SGCA):c.585-1G>APathogenic
not provided|Autosomal recessive limb-girdle muscular dystrophy type 2D|Autosomal recessive limb-girdle muscular dystrophy
β˜…β˜…β˜…β˜†2025
NM_000023.4(SGCA):c.574C>T (p.Arg192Ter)Pathogenic
Autosomal recessive limb-girdle muscular dystrophy type 2D|not provided|Abnormality of the musculature|Autosomal recessive limb-girdle muscular dystrophy
β˜…β˜…β˜…β˜†2025β†’ Residue 192
NM_000023.4(SGCA):c.724G>T (p.Val242Phe)Pathogenic
Autosomal recessive limb-girdle muscular dystrophy type 2D
β˜…β˜…β˜†β˜†2026β†’ Residue 242
NM_000023.4(SGCA):c.739G>A (p.Val247Met)Pathogenic
Autosomal recessive limb-girdle muscular dystrophy type 2D|not provided|Sarcoglycanopathy|Autosomal recessive limb-girdle muscular dystrophy|See cases
β˜…β˜…β˜†β˜†2026β†’ Residue 247
NM_000023.4(SGCA):c.269A>G (p.Tyr90Cys)Likely pathogenic
Autosomal recessive limb-girdle muscular dystrophy|Autosomal recessive limb-girdle muscular dystrophy type 2D|not provided
β˜…β˜…β˜†β˜†2026β†’ Residue 90
NM_000023.4(SGCA):c.409G>A (p.Glu137Lys)Pathogenic
Autosomal recessive limb-girdle muscular dystrophy type 2D|not provided
β˜…β˜…β˜†β˜†2026β†’ Residue 137
NM_000023.4(SGCA):c.614C>A (p.Pro205His)Pathogenic
not provided|Autosomal recessive limb-girdle muscular dystrophy type 2D|SGCA-related disorder|Autosomal recessive limb-girdle muscular dystrophy
β˜…β˜…β˜†β˜†2026β†’ Residue 205
NM_000023.4(SGCA):c.293G>A (p.Arg98His)Pathogenic
Autosomal recessive limb-girdle muscular dystrophy type 2D|not provided|Autosomal recessive limb-girdle muscular dystrophy
β˜…β˜…β˜†β˜†2025β†’ Residue 98
NM_000023.4(SGCA):c.292C>A (p.Arg98Ser)Pathogenic
Autosomal recessive limb-girdle muscular dystrophy|Autosomal recessive limb-girdle muscular dystrophy type 2D
β˜…β˜…β˜†β˜†2025β†’ Residue 98
NM_000023.4(SGCA):c.317_318del (p.Thr106fs)Pathogenic
not provided|Autosomal recessive limb-girdle muscular dystrophy type 2D
β˜…β˜…β˜†β˜†2025β†’ Residue 106
View on ClinVar β†—
Related Genes
FKTNProtein interaction100%LAMA2Protein interaction100%POMGNT1Protein interaction99%CAV3Protein interaction97%DAG1Protein interaction97%DMDProtein interaction97%
Tissue Expression6 tissues
Heart
100%
Lung
23%
Liver
3%
Ovary
1%
Brain
0%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
SGCAFKTNLAMA2POMGNT1CAV3DAG1DMD
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q16586
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
1.27LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.96 [0.73–1.27]
RankingsWhere SGCA stands among ~20K protein-coding genes
  • #8,609of 20,598
    Most Researched52
  • #377of 5,498
    Most Pathogenic Variants186 Β· top 10%
  • #13,422of 17,882
    Most Constrained (LOEUF)1.27
Genes detectedSGCA
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Sequential targeted exome sequencing of 1001 patients affected by unexplained limb-girdle weakness.
PMID: 32528171
Genet Med Β· 2020
1.00
2
A 20-year Clinical and Genetic Neuromuscular Cohort Analysis in Lebanon: An International Effort.
PMID: 34602496
J Neuromuscul Dis Β· 2022
0.90
3
Assessment of Systemic Delivery of rAAVrh74.MHCK7.micro-dystrophin in Children With Duchenne Muscular Dystrophy: A Nonrandomized Controlled Trial.
PMID: 32539076
JAMA Neurol Β· 2020
0.80
4
Clinical and Genomic Evaluation of 207 Genetic Myopathies in the Indian Subcontinent.
PMID: 33250842
Front Neurol Β· 2020
0.70
5
Sarcoglycanopathies: an update.
PMID: 34404573
Neuromuscul Disord Β· 2021
0.60