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GeneE
25 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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SLC16A1
solute carrier family 16 member 1
Chromosome 1 Β· 1p13.2
NCBI Gene: 6566Ensembl: ENSG00000155380.14HGNC: HGNC:10922UniProt: B4DKS0
347PubMed Papers
3Diseases
0Drugs
23Pathogenic Variants
FUNCTIONAL ROLE
Transporter
RESEARCH IMPACT
Highly StudiedTrending
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
monocarboxylic acid transmembrane transporter activityapical plasma membranelateral plasma membranecell junctionSymptomatic deficiency in lactate transportHyperinsulinemic hypoglycemia, familial, 7Monocarboxylate transporter 1 deficiency
✦AI Summary

SLC16A1 encodes a bidirectional proton-coupled monocarboxylate transporter (MCT1) that catalyzes rapid transport of monocarboxylates including lactate, pyruvate, acetate, and ketone bodies across the plasma membrane 12. Transport direction depends on the proton motive force and substrate concentration gradient, with SLC16A1 functioning as a major lactate exporter 1. The transporter uses alternating conformational states, with protonation of Asp309 essential for this conformational transition 2. SLC16A1 also facilitates succinate export under acidic conditions in exercising muscle and ischemic heart 3. Beyond metabolite transport, SLC16A1 serves as a substrate for gamma-hydroxybutyrate, influencing its pharmacokinetics and tissue uptake 4. Clinically, SLC16A1 mutations cause congenital hyperinsulinemic hypoglycemia (HH), a disease characterized by inappropriate insulin secretion and severe hypoglycemia in neonates and children 5. SLC16A1 mutations account for a minority of diazoxide-responsive HH cases 6. In cancer biology, SLC16A1 promotes pancreatic adenocarcinoma progression by regulating lactate-mediated metabolic signaling, and its exosomal antisense RNA (SLC16A1-AS1) facilitates hepatocellular carcinoma progression through macrophage M2 polarization 78. Additionally, SLC16A1 expression inhibits pancreatic Ξ²-cell proliferation and insulin secretion, linking it to type 2 diabetes pathogenesis 9.

Sources cited
1
SLC16A1 is a bidirectional proton-coupled monocarboxylate transporter and major lactate exporter
PMID: 12946269
2
SLC16A1 catalyzes monocarboxylate transport with conformational transitions dependent on Asp309 protonation
PMID: 33333023
3
SLC16A1 facilitates protonated succinate export in exercising muscle and ischemic heart
PMID: 32946811
4
SLC16A1 is a substrate for gamma-hydroxybutyrate, influencing its pharmacokinetics and tissue uptake
PMID: 33417072
5
SLC16A1 mutations cause congenital hyperinsulinemic hypoglycemia
PMID: 29280746
6
SLC16A1 mutations account for a minority of diazoxide-responsive HH cases
PMID: 23275527
7
SLC16A1 promotes pancreatic adenocarcinoma progression through lactate transport and lactylation regulation
PMID: 38817665
8
SLC16A1-AS1 facilitates hepatocellular carcinoma progression via lactate-mediated M2 macrophage polarization
PMID: 39247822
9
SLC16A1 expression inhibits pancreatic Ξ²-cell proliferation and insulin secretion in type 2 diabetes
PMID: 38742851
Disease Associationsβ“˜3
Hyperinsulinemic hypoglycemia, familial, 7UniProt
Monocarboxylate transporter 1 deficiencyUniProt
Symptomatic deficiency in lactate transportUniProt
Pathogenic Variants23
NM_003051.4(SLC16A1):c.499del (p.Val167fs)Pathogenic
Monocarboxylate transporter 1 deficiency, autosomal dominant|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 167
NM_003051.4(SLC16A1):c.747_750del (p.Asn250fs)Pathogenic
Monocarboxylate transporter 1 deficiency, autosomal dominant|Metabolic myopathy due to lactate transporter defect|not provided|Ketoacidosis due to monocarboxylate transporter-1 deficiency
β˜…β˜…β˜†β˜†2024β†’ Residue 250
NM_003051.4(SLC16A1):c.427C>T (p.Arg143Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 143
NM_003051.4(SLC16A1):c.74G>T (p.Gly25Val)Likely pathogenic
Ketoacidosis due to monocarboxylate transporter-1 deficiency
β˜…β˜†β˜†β˜†2025β†’ Residue 25
NM_003051.4(SLC16A1):c.1207C>T (p.Leu403Phe)Likely pathogenic
Ketoacidosis due to monocarboxylate transporter-1 deficiency
β˜…β˜†β˜†β˜†2025β†’ Residue 403
NM_003051.4(SLC16A1):c.97del (p.Ser33fs)Likely pathogenic
Exercise-induced hyperinsulinism
β˜…β˜†β˜†β˜†2024β†’ Residue 33
NM_003051.4(SLC16A1):c.1079del (p.Ala360fs)Pathogenic
Ketoacidosis due to monocarboxylate transporter-1 deficiency|Exercise-induced hyperinsulinism
β˜…β˜†β˜†β˜†2024β†’ Residue 360
NM_003051.4(SLC16A1):c.202dup (p.Val68fs)Pathogenic
SLC16A1-related disorder
β˜…β˜†β˜†β˜†2024β†’ Residue 68
NM_003051.4(SLC16A1):c.672dup (p.Asp225fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 225
NM_003051.4(SLC16A1):c.97T>N (p.Ser33Xaa)Likely pathogenic
not specified
β˜…β˜†β˜†β˜†2024β†’ Residue 33
NM_003051.4(SLC16A1):c.719_720del (p.Gln240fs)Pathogenic
SLC16A1-related disorder
β˜…β˜†β˜†β˜†2023β†’ Residue 240
NM_003051.4(SLC16A1):c.339C>A (p.Tyr113Ter)Pathogenic
SLC16A1-related disorder
β˜…β˜†β˜†β˜†2023β†’ Residue 113
NM_003051.4(SLC16A1):c.1153C>T (p.Gln385Ter)Likely pathogenic
Ketoacidosis due to monocarboxylate transporter-1 deficiency
β˜…β˜†β˜†β˜†2023β†’ Residue 385
NM_003051.4(SLC16A1):c.764T>G (p.Leu255Ter)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 255
NM_003051.4(SLC16A1):c.41del (p.Pro14fs)Likely pathogenic
Ketoacidosis due to monocarboxylate transporter-1 deficiency
β˜…β˜†β˜†β˜†2022β†’ Residue 14
NM_003051.4(SLC16A1):c.490dup (p.Leu164fs)Likely pathogenic
Monocarboxylate transporter 1 deficiency, autosomal dominant|not provided
β˜…β˜†β˜†β˜†2022β†’ Residue 164
NM_003051.4(SLC16A1):c.727C>T (p.Arg243Ter)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2021β†’ Residue 243
NM_003051.4(SLC16A1):c.328C>T (p.Gln110Ter)Likely pathogenic
Exercise-induced hyperinsulinism
β˜…β˜†β˜†β˜†2019β†’ Residue 110
NM_003051.4(SLC16A1):c.982C>T (p.Arg328Ter)Pathogenic
Monocarboxylate transporter 1 deficiency, autosomal recessive|Exercise-induced hyperinsulinism
β˜…β˜†β˜†β˜†2019β†’ Residue 328
NM_003051.3(SLC16A1):c.218delGPathogenic
not provided
β˜…β˜†β˜†β˜†2017
View on ClinVar β†—
Related Genes
BSGProtein interaction97%EMBProtein interaction97%SLC18B1Protein interaction83%SLC18A1Protein interaction78%CA2Protein interaction76%KCNJ11Protein interaction71%
Tissue Expression

No tissue expression data available for this gene.

Gene Interaction Network
Click a node to explore
SLC16A1BSGEMBSLC18B1SLC18A1CA2KCNJ11
PROTEIN STRUCTURE
Preparing viewer…
PDB7CKO Β· 2.95 Γ… Β· EM
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.59Moderately Constrained
pLIβ“˜
0.73Intermediate
Observed/Expected LoF0.36 [0.23–0.59]
RankingsWhere SLC16A1 stands among ~20K protein-coding genes
  • #923of 20,598
    Most Researched347 Β· top 5%
  • #2,033of 5,498
    Most Pathogenic Variants23
  • #4,005of 17,882
    Most Constrained (LOEUF)0.59 Β· top quartile
Genes detectedSLC16A1
Sources retrieved25 papers
Response timeβ€”
πŸ“„ Sources
25β–Ό
1
Ξ³-Hydroxybutyric Acid: Pharmacokinetics, Pharmacodynamics, and Toxicology.
PMID: 33417072
AAPS J Β· 2021
1.00
2
Novel lactylation-related signature to predict prognosis for pancreatic adenocarcinoma.
PMID: 38817665
World J Gastroenterol Β· 2024
0.90
3
Congenital Hyperinsulinism: Diagnosis and Treatment Update.
PMID: 29280746
J Clin Res Pediatr Endocrinol Β· 2017
0.80
4
Genotype and phenotype correlations in 417 children with congenital hyperinsulinism.
PMID: 23275527
J Clin Endocrinol Metab Β· 2013
0.70
5
The SLC16 gene family - structure, role and regulation in health and disease.
PMID: 23506875
Mol Aspects Med Β· 2013
0.68