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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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SLC35B3
solute carrier family 35 member B3
Chromosome 6 · 6p24.3
NCBI Gene: 51000Ensembl: ENSG00000124786.13HGNC: HGNC:21601UniProt: A0A024QZW4
21PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activityGolgi membraneendoplasmic reticulum membrane3'-phosphoadenosine 5'-phosphosulfate transportobesitysmoking initiationoropharynx cancerendocrine neoplasm
✦AI Summary

SLC35B3 encodes a 3'-phosphoadenosine 5'-phosphosulfate (PAPS) transporter localized to the Golgi membrane that mediates PAPS transport from the cytosol into the Golgi lumen, enabling sulfation reactions within this compartment 1. As a key component of the sulfation machinery, SLC35B3 expression is upregulated by the aryl hydrocarbon receptor in response to the microbial metabolite indole-3-acetic acid, enhancing intestinal mucin sulfation and maintaining barrier homeostasis 2. Functionally, SLC35B3 is involved in critical developmental processes, with genome-wide association studies identifying SLC35B3 as significantly associated with cleft palate susceptibility 3. The gene also associates with glucose effectiveness and type 2 diabetes risk in Mexican American populations 4. Additionally, SLC35B3 expression is altered in chemotherapy-resistant ovarian cancer tissues 5, and copy number variations at the SLC35B3 locus show nominal associations with non-small cell lung cancer development 6. The gene lies within a region susceptible to microdeletion on chromosome 6.1p24.3, where loss of SLC35B3 and neighboring genes contributes to developmental abnormalities including intellectual disability and cardiac defects 7. These findings establish SLC35B3 as a multifunctional sulfation transporter with roles in intestinal homeostasis, craniofacial development, metabolic regulation, and cancer biology.

Sources cited
1
PAPST2/SLC35B3 functions as a PAPS transporter on the Golgi apparatus required for sulfated glycoconjugate synthesis
PMID: 16492677
2
SLC35B3 is upregulated via the AHR-Papss2-Slc35b3 pathway by indole-3-acetic acid, enhancing mucin sulfation and intestinal barrier protection
PMID: 39068517
3
SLC35B3 is associated with cleft palate susceptibility in genome-wide association studies of orofacial clefts
PMID: 41075272
4
SLC35B3/TFAP2A locus at 6p24 associates with glucose effectiveness and type 2 diabetes risk
PMID: 25524916
5
SLC35B3 is differentially expressed between chemotherapy-responsive and chemotherapy-resistant ovarian cancer tissues
PMID: 20181382
6
SLC35B3 shows nominal associations with non-small cell lung cancer risk via copy number variation
PMID: 33307925
7
SLC35B3 deletion in 6p25.1p24.3 microdeletions contributes to developmental abnormalities including intellectual disability and cardiac defects
PMID: 33707360
Disease Associationsⓘ20
obesityOpen Targets
0.27Weak
smoking initiationOpen Targets
0.26Weak
oropharynx cancerOpen Targets
0.23Weak
endocrine neoplasmOpen Targets
0.23Weak
motion sicknessOpen Targets
0.23Weak
adolescent idiopathic scoliosisOpen Targets
0.22Weak
cartilage diseaseOpen Targets
0.22Weak
gastrointestinal diseaseOpen Targets
0.21Weak
androgenetic alopeciaOpen Targets
0.21Weak
inherited hemoglobinopathyOpen Targets
0.20Weak
overnutritionOpen Targets
0.20Weak
paranoid personality disorderOpen Targets
0.19Weak
autosomal dominant compelling helio-ophthalmic outburst syndromeOpen Targets
0.19Weak
complicationOpen Targets
0.17Weak
gastritisOpen Targets
0.17Weak
Herpes ZosterOpen Targets
0.17Weak
placenta praeviaOpen Targets
0.17Weak
flatulenceOpen Targets
0.17Weak
nervous system diseaseOpen Targets
0.16Weak
osteoarthritis, handOpen Targets
0.08Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SLC35D1Protein interaction86%SLC35D3Protein interaction85%SLC35D2Protein interaction82%SLC35C1Protein interaction72%
Tissue Expression6 tissues
Liver
100%
Lung
70%
Heart
68%
Brain
65%
Ovary
55%
Bone Marrow
37%
Gene Interaction Network
Click a node to explore
SLC35B3SLC35D1SLC35D3SLC35D2SLC35C1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q9H1N7
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.14LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.73 [0.48–1.14]
RankingsWhere SLC35B3 stands among ~20K protein-coding genes
  • #14,016of 20,598
    Most Researched21
  • #11,802of 17,882
    Most Constrained (LOEUF)1.14
Genes detectedSLC35B3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Gut microbiota metabolite indole-3-acetic acid maintains intestinal epithelial homeostasis through mucin sulfation.
PMID: 39068517
Gut Microbes · 2024
1.00
2
Difference of copy number variation in blood of patients with lung cancer.
PMID: 33307925
Int J Biol Markers · 2021
0.90
3
[Specifically up-regulated non-coding RNA gene HULC in tumor cell lines and its effects on the expression of neighboring gene SLC35B3].
PMID: 21211351
Zhonghua Yi Xue Za Zhi · 2010
0.80
4
Genetic heterogeneity and homogeneity among orofacial cleft subtypes: genome-wide association studies in the cleft collective.
PMID: 41075272
Hum Mol Genet · 2025
0.70
5
Analysis of chemotherapy response programs in ovarian cancers by the next-generation sequencing technologies.
PMID: 20181382
Gynecol Oncol · 2010
0.60