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9 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SLC35D2
solute carrier family 35 member D2
Chromosome 9 · 9q22.32
NCBI Gene: 11046Ensembl: ENSG00000130958.14HGNC: HGNC:20799UniProt: Q76EJ3
11PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
nucleotide-sugar transmembrane transporter activityheparan sulfate proteoglycan biosynthetic processGolgi apparatusGolgi membranemathematical abilityintelligencecervical carcinomaastrocytoma
✦AI Summary

SLC35D2 is a Golgi-localized nucleotide sugar antiporter that transports UDP-N-acetylglucosamine (UDP-GlcNAc) and UDP-glucose (UDP-Glc) from the cytosol into the Golgi lumen in exchange for UMP 1. The protein contains 10 transmembrane helices and maps to chromosome 9.33 1. As a member of the SLC35 nucleotide sugar transporter family, SLC35D2 supplies activated sugar substrates to glycosyltransferases within the Golgi, supporting heparan sulfate proteoglycan biosynthesis 2. Recent crystal structure analysis of the yeast SLC35D2 homolog Vrg-4 has provided mechanistic insights into antiporter function and substrate recognition 2. Beyond normal glycosylation, SLC35D2 is co-opted by the intracellular pathogen Chlamydia trachomatis to import UDP-glucose into the parasitophorous vacuole, enabling bacterial glycogen synthesis and nutrient sequestration 3. In breast cancer cells, SLC35D2 expression is downregulated following disruption of chondroitin/dermatan sulfate biosynthesis, indicating coordinated regulation of glycosaminoglycan synthesis pathways 4. SLC35D2 mRNA is expressed ubiquitously across adult and fetal tissues 5. A genetic variant in SLC35D2 showed association with overall survival in advanced non-small cell lung cancer patients, suggesting potential clinical relevance 6.

Sources cited
1
SLC35D2 is a Golgi-localized nucleotide sugar transporter with 337 amino acids and 10 transmembrane helices; maps to chromosome 9q22.33; transports UDP-GlcNAc and UDP-Glc
PMID: 15607426
2
SLC35D2 is part of the SLC35 nucleotide sugar transporter family; crystal structure of yeast homolog Vrg-4 provides mechanistic insights
PMID: 31462968
3
Chlamydia trachomatis co-opts host SLC35D2 to import UDP-glucose into the parasitophorous vacuole for bacterial glycogen synthesis
PMID: 26981769
4
SLC35D2 expression is downregulated in breast cancer cells with disrupted chondroitin/dermatan sulfate biosynthesis, indicating coordinated glycosaminoglycan synthesis regulation
PMID: 27744520
5
SLC35D2 mRNA is expressed ubiquitously across adult and fetal human tissues
PMID: 19252338
6
A genetic variant in SLC35D2 (genomic region 9p22.1) showed association with overall survival in advanced non-small cell lung cancer patients
PMID: 23144319
7
SLC35D2 homologous protein HFRC1 transports UDP-GlcNAc and UDP-Glc and is involved in heparan sulfate biosynthesis
PMID: 15082721
Disease Associationsⓘ20
mathematical abilityOpen Targets
0.05Suggestive
intelligenceOpen Targets
0.05Suggestive
cervical carcinomaOpen Targets
0.04Suggestive
astrocytomaOpen Targets
0.01Suggestive
glioblastoma multiformeOpen Targets
0.01Suggestive
infectionOpen Targets
0.01Suggestive
migraine disorderOpen Targets
0.01Suggestive
nonpapillary renal cell carcinomaOpen Targets
0.00Suggestive
HydrocephalusOpen Targets
0.00Suggestive
VertigoOpen Targets
0.00Suggestive
melanomaOpen Targets
0.00Suggestive
clear cell renal carcinomaOpen Targets
0.00Suggestive
colon adenocarcinomaOpen Targets
0.00Suggestive
colorectal adenocarcinomaOpen Targets
0.00Suggestive
glioma susceptibility 1Open Targets
0.00Suggestive
hereditary breast carcinomaOpen Targets
0.00Suggestive
lung cancerOpen Targets
0.00Suggestive
thyroid cancer, nonmedullary, 1Open Targets
0.00Suggestive
uterine corpus endometrial carcinomaOpen Targets
0.00Suggestive
Uveal MelanomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SLC35A1Protein interaction93%SLC35B2Protein interaction83%MAN2A2Protein interaction82%SLC35B3Protein interaction82%SLC35B1Protein interaction78%MAN2A1Protein interaction77%
Tissue Expression6 tissues
Liver
100%
Ovary
38%
Lung
36%
Brain
24%
Heart
12%
Bone Marrow
11%
Gene Interaction Network
Click a node to explore
SLC35D2SLC35A1SLC35B2MAN2A2SLC35B3SLC35B1MAN2A1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q76EJ3
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.94LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF1.54 [0.88–1.94]
RankingsWhere SLC35D2 stands among ~20K protein-coding genes
  • #16,899of 20,598
    Most Researched11
  • #17,537of 17,882
    Most Constrained (LOEUF)1.94
Genes detectedSLC35D2
Sources retrieved9 papers
Response time—
📄 Sources
9▼
1
Nucleotide Sugar Transporter SLC35 Family Structure and Function.
PMID: 31462968
Comput Struct Biotechnol J · 2019
1.00
2
Identification and characterization of human Golgi nucleotide sugar transporter SLC35D2, a novel member of the SLC35 nucleotide sugar transporter family.
PMID: 15607426
Genomics · 2005
0.89
3
Integrated analysis of potential gene crosstalk between non-alcoholic fatty liver disease and diabetic nephropathy.
PMID: 36387855
Front Endocrinol (Lausanne) · 2022
0.78
4
Sequestration of host metabolism by an intracellular pathogen.
PMID: 26981769
Elife · 2016
0.67
5
Prognostic implications of genetic variants in advanced non-small cell lung cancer: a genome-wide association study.
PMID: 23144319
Carcinogenesis · 2013
0.56