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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SLC39A11
solute carrier family 39 member 11
Chromosome 17 · 17q24.3-q25.1
NCBI Gene: 201266Ensembl: ENSG00000133195.13HGNC: HGNC:14463UniProt: Q8N1S5
35PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
copper ion transmembrane transporter activityzinc ion transmembrane transporter activityzinc ion import across plasma membraneGolgi apparatustype 2 diabetes mellituspreeclampsiaulcerative colitisresponse to stimulus
✦AI Summary

SLC39A11 (ZIP11) is a metal transporter primarily involved in zinc homeostasis, with emerging roles in manganese transport and cellular aging processes. The protein regulates cytosolic zinc concentrations through transport from extracellular compartments or intracellular organelles, with predominant localization in the nucleus and Golgi apparatus 1. SLC39A11 exhibits tissue-specific regulation, being highly expressed in stomach and colon where it responds to dietary zinc availability and helps maintain mucosal integrity 1. Recent studies have identified SLC39A11 as a longevity-associated gene, with mutations causing accelerated aging phenotypes in zebrafish through cellular senescence pathways 2. Notably, SLC39A11 functions as a manganese transporter, protecting against aging by regulating cellular manganese homeostasis and preventing manganese accumulation 2. The gene shows clinical relevance across multiple diseases: genetic variants associate with neurodegeneration biomarkers 3, inflammatory bowel disease through calprotectin regulation 4, male fertility via seminal zinc levels 5, and breast cancer prognosis 67. Single nucleotide polymorphisms in SLC39A11 significantly affect its transport function and cellular phenotypes including proliferation and migration 8, highlighting its importance in disease susceptibility and progression.

Sources cited
1
SLC39A11 localizes to nucleus and Golgi apparatus, regulates zinc homeostasis, and is highly expressed in stomach and colon with dietary zinc responsiveness
PMID: 24089422
2
SLC39A11 is a longevity-associated gene that functions as a manganese transporter and protects against cellular aging through manganese homeostasis regulation
PMID: 39114488
3
SLC39A11 genetic variants associate with blood neurofilament light levels, a biomarker of neurodegeneration
PMID: 39251807
4
SLC39A11 regulates calprotectin expression in myeloid cells and is linked to inflammatory bowel disease
PMID: 36155972
5
SLC39A11 SNPs significantly affect seminal plasma zinc concentration and male fertility
PMID: 35834148
6
SLC39A11 copy number alterations serve as prognostic biomarkers in breast cancer
PMID: 35739271
7
SLC39A11 is part of zinc metabolism-related gene signature for breast cancer prognosis prediction
PMID: 38259456
8
SLC39A11 SNPs affect protein function and cellular phenotypes including proliferation and migration
PMID: 38285610
Disease Associationsⓘ20
type 2 diabetes mellitusOpen Targets
0.45Moderate
preeclampsiaOpen Targets
0.40Moderate
ulcerative colitisOpen Targets
0.37Weak
response to stimulusOpen Targets
0.32Weak
VitiligoOpen Targets
0.31Weak
inflammatory bowel diseaseOpen Targets
0.31Weak
systemic lupus erythematosusOpen Targets
0.29Weak
benign colon neoplasmOpen Targets
0.28Weak
Alzheimer diseaseOpen Targets
0.28Weak
sclerosing cholangitisOpen Targets
0.26Weak
ankylosing spondylitisOpen Targets
0.26Weak
Crohn's diseaseOpen Targets
0.26Weak
psoriasisOpen Targets
0.26Weak
COVID-19Open Targets
0.25Weak
injuryOpen Targets
0.23Weak
generalized dystoniaOpen Targets
0.23Weak
Pancreatic pseudocystOpen Targets
0.23Weak
pathological myopiaOpen Targets
0.23Weak
Dupuytren ContractureOpen Targets
0.23Weak
neuroendocrine neoplasmOpen Targets
0.22Weak
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SLC30A1Protein interaction81%SLC30A5Protein interaction81%SLC30A7Protein interaction81%SLC30A4Protein interaction74%SLC39A7Protein interaction74%SLC30A9Protein interaction74%
Tissue Expression6 tissues
Liver
100%
Bone Marrow
66%
Brain
36%
Lung
29%
Heart
15%
Ovary
9%
Gene Interaction Network
Click a node to explore
SLC39A11SLC30A1SLC30A5SLC30A7SLC30A4SLC39A7SLC30A9
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q8N1S5
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.25LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.92 [0.69–1.25]
RankingsWhere SLC39A11 stands among ~20K protein-coding genes
  • #11,069of 20,598
    Most Researched35
  • #13,155of 17,882
    Most Constrained (LOEUF)1.25
Genes detectedSLC39A11
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
A Novel Role for the Longevity-Associated Protein SLC39A11 as a Manganese Transporter.
PMID: 39114488
Research (Wash D C) · 2024
1.00
2
Genome-wide association study meta-analysis of neurofilament light (NfL) levels in blood reveals novel loci related to neurodegeneration.
PMID: 39251807
Commun Biol · 2024
0.90
3
Gastric and colonic zinc transporter ZIP11 (Slc39a11) in mice responds to dietary zinc and exhibits nuclear localization.
PMID: 24089422
J Nutr · 2013
0.80
4
Prostaglandins and calprotectin are genetically and functionally linked to the Inflammatory Bowel Diseases.
PMID: 36155972
PLoS Genet · 2022
0.70
5
Single nucleotide polymorphisms and Zn transport by ZIP11 shape functional phenotypes of HeLa cells.
PMID: 38285610
Metallomics · 2024
0.60