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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SLC39A9
solute carrier family 39 member 9
Chromosome 14 · 14q24.1
NCBI Gene: 55334Ensembl: ENSG00000029364.12HGNC: HGNC:20182UniProt: B4DDK0
35PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
G protein-coupled receptor activityzinc ion transmembrane transporter activityandrogen bindingprotein bindingneurodegenerative diseaseIntrahepatic cholestasis of pregnancycontracturehepatocellular carcinoma
✦AI Summary

SLC39A9 is a zinc transporter protein that functions as both a conventional zinc importer and a membrane androgen receptor. As a zinc transporter, SLC39A9 facilitates zinc ion transport across cellular and organellar membranes, regulating intracellular zinc homeostasis and participating in zinc efflux from secretory compartments 1. The protein plays a critical role in cellular processes by modulating zinc availability in the tumor microenvironment, where cancer cells upregulate SLC39A9 to accumulate intracellular zinc while depleting environmental zinc, affecting tumor-associated macrophage function 1. SLC39A9 also serves as a non-classical membrane androgen receptor, mediating androgen signaling through G protein-coupled pathways that activate MAPK and other downstream effectors 23. This dual functionality enables SLC39A9 to promote cancer cell migration and invasion in androgen receptor-negative bladder cancer cells via DHT/mAR-SLC39A9/Gαi/MAPK/MMP9 signaling 2. Additionally, SLC39A9 functions as an entry factor for viral infections, directly binding viral proteins to facilitate cellular entry 4. The protein's expression is altered in brain tissue with aging and obesity, and increased expression correlates with enhanced glioblastoma cell migration 56.

Sources cited
1
SLC39A9 upregulation in cancer cells leads to intracellular zinc accumulation and environmental zinc depletion, affecting macrophage function
PMID: 39975044
2
SLC39A9 functions as membrane androgen receptor mediating DHT-induced invasion in AR-negative bladder cancer cells via Gαi/MAPK/MMP9 signaling
PMID: 31506605
3
SLC39A9 serves as membrane androgen receptor in ovarian follicle cells, mediating androgen-induced zinc influx
PMID: 38889246
4
SLC39A9 acts as entry factor for Ebola virus infection by directly binding viral GP protein
PMID: 39173055
5
SLC39A9 expression is altered in human brain with aging and obesity
PMID: 27300264
6
ZIP9/SLC39A9 expression enhances glioblastoma cell migration and affects p53 and GSK-3β phosphorylation
PMID: 27654922
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.46Moderate
Intrahepatic cholestasis of pregnancyOpen Targets
0.37Weak
contractureOpen Targets
0.24Weak
hepatocellular carcinomaOpen Targets
0.06Suggestive
duodenitisOpen Targets
0.05Suggestive
melanomaOpen Targets
0.04Suggestive
Abnormality of the skeletal systemOpen Targets
0.03Suggestive
viral diseaseOpen Targets
0.03Suggestive
cancerOpen Targets
0.03Suggestive
glioblastomaOpen Targets
0.03Suggestive
neoplasmOpen Targets
0.02Suggestive
prostate cancerOpen Targets
0.02Suggestive
benign neoplasmOpen Targets
0.02Suggestive
Zinc deficiencyOpen Targets
0.02Suggestive
obesityOpen Targets
0.02Suggestive
infectionOpen Targets
0.01Suggestive
breast cancerOpen Targets
0.01Suggestive
polycystic ovary syndromeOpen Targets
0.01Suggestive
gliomaOpen Targets
0.01Suggestive
liver cancerOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SLC30A6Protein interaction89%SLC39A10Protein interaction76%SLC39A11Protein interaction74%SLC39A4Protein interaction74%SLC30A4Protein interaction74%SLC39A14Protein interaction74%
Tissue Expression6 tissues
Liver
100%
Brain
91%
Bone Marrow
50%
Lung
47%
Heart
46%
Ovary
42%
Gene Interaction Network
Click a node to explore
SLC39A9SLC30A6SLC39A10SLC39A11SLC39A4SLC30A4SLC39A14
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q9NUM3
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.74LoF Tolerant
pLIⓘ
0.09Tolerant
Observed/Expected LoF0.46 [0.29–0.74]
RankingsWhere SLC39A9 stands among ~20K protein-coding genes
  • #11,070of 20,598
    Most Researched35
  • #5,845of 17,882
    Most Constrained (LOEUF)0.74
Genes detectedSLC39A9
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Genome-wide CRISPR/Cas9 screen identifies SLC39A9 and PIK3C3 as crucial entry factors for Ebola virus infection.
PMID: 39173055
PLoS Pathog · 2024
1.00
2
Zinc availability in the tumor microenvironment dictates anti-PD1 response in
PMID: 39975044
bioRxiv · 2025
0.90
3
Novel regulators of heparan sulfate proteoglycans modulate cellular uptake of α-synuclein fibrils.
PMID: 41053297
Commun Biol · 2025
0.80
4
Novel Plasma Membrane Androgen Receptor SLC39A9 Mediates Ovulatory Changes in Cells of the Monkey Ovarian Follicle.
PMID: 38889246
Endocrinology · 2024
0.70
5
Obesity and age-related alterations in the gene expression of zinc-transporter proteins in the human brain.
PMID: 27300264
Transl Psychiatry · 2016
0.60