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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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SLC5A3
solute carrier family 5 member 3
Chromosome 21 · 21q22.11
NCBI Gene: 6526Ensembl: ENSG00000198743.7HGNC: HGNC:11038UniProt: P53794
45PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
plasma membranetransmembrane transporter bindingprotein bindingmyo-inositol:sodium symporter activityneurodegenerative diseaseCOVID-19coronary artery diseasemyocardial infarction
✦AI Summary

SLC5A3 is an electrogenic sodium-coupled myo-inositol transporter located on chromosome 21 that plays critical roles in cellular osmoregulation and cancer progression 1. The gene consists of two exons spanning approximately 26 kb, with the entire 2157-bp open reading frame contained in exon 2 2. SLC5A3 actively transports myo-inositol across plasma membranes with a 2:1 Na+:sugar coupling ratio, maintaining cellular myo-inositol gradients essential for osmotic stress response 3. The transporter demonstrates significant clinical relevance in multiple cancers. In acute myeloid leukemia, SLC5A3 represents a metabolic vulnerability for cells dependent on exogenous myo-inositol 4. In pancreatic cancer, SLC5A3 upregulation promotes gemcitabine resistance by stabilizing mitochondrial function and inhibiting apoptosis, while its depletion disrupts mitochondrial dynamics and enhances chemotherapy efficacy 5. Similarly, SLC5A3 promotes growth in non-small cell lung cancer and cervical cancer through myo-inositol-dependent Akt-mTOR pathway activation 67. In glioblastoma, SLC5A3 localizes to migrating cell edges and enhances cell migration 8. Given its chr21 location, SLC5A3 overexpression may contribute to Down syndrome pathophysiology 1.

Sources cited
1
SLC5A3 is located on chromosome 21 and encodes a 718 amino acid Na+/myo-inositol cotransporter
PMID: 7789985
2
Gene structure consists of two exons spanning 26 kb with the open reading frame in exon 2
PMID: 9441750
3
SLC5A3 knockout results in severe myo-inositol deficiency and can be rescued by myo-inositol supplementation
PMID: 18675571
4
SLC5A3 represents a metabolic vulnerability in acute myeloid leukemia cells dependent on exogenous myo-inositol
PMID: 34531254
5
SLC5A3 promotes gemcitabine resistance in pancreatic cancer by stabilizing mitochondrial function and inhibiting apoptosis
PMID: 40055335
6
SLC5A3 promotes non-small cell lung cancer growth through myo-inositol-dependent Akt-mTOR activation
PMID: 35760803
7
SLC5A3 enhances cervical cancer cell growth via myo-inositol transport and Akt-mTOR pathway activation
PMID: 37324953
8
SLC5A3 localizes to leading edges of migrating glioblastoma cells and promotes cell migration
PMID: 36497276
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.49Moderate
COVID-19Open Targets
0.30Weak
coronary artery diseaseOpen Targets
0.26Weak
myocardial infarctionOpen Targets
0.25Weak
Myocardial IschemiaOpen Targets
0.25Weak
HypercholesterolemiaOpen Targets
0.25Weak
coronary atherosclerosisOpen Targets
0.24Weak
angina pectorisOpen Targets
0.24Weak
cardiovascular diseaseOpen Targets
0.24Weak
gram-negative bacterial infectionsOpen Targets
0.23Weak
migraine disorderOpen Targets
0.23Weak
heart diseaseOpen Targets
0.20Weak
major depressive disorderOpen Targets
0.20Weak
spontaneous coronary artery dissectionOpen Targets
0.20Weak
heart failureOpen Targets
0.18Weak
intermediate coronary syndromeOpen Targets
0.16Weak
percutaneous transluminal coronary angioplastyOpen Targets
0.15Weak
coronary artery bypassOpen Targets
0.14Weak
coronary artery calcificationOpen Targets
0.12Weak
acute myeloid leukemiaOpen Targets
0.10Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SLC6A12Protein interaction84%NFAT5Protein interaction79%AKR1B1Protein interaction75%SLC2A13Protein interaction74%SLC13A3Shared pathway22%SLC5A1Shared pathway20%
Tissue Expression6 tissues
Liver
100%
Ovary
75%
Bone Marrow
73%
Brain
72%
Lung
65%
Heart
32%
Gene Interaction Network
Click a node to explore
SLC5A3SLC6A12NFAT5AKR1B1SLC2A13SLC13A3SLC5A1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt P53794
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.37Moderately Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.22 [0.13–0.37]
RankingsWhere SLC5A3 stands among ~20K protein-coding genes
  • #9,522of 20,598
    Most Researched45
  • #1,754of 17,882
    Most Constrained (LOEUF)0.37 · top 10%
Genes detectedSLC5A3
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
An
PMID: 34531254
Cancer Discov · 2022
1.00
2
SLC5A3 depletion promotes apoptosis by inducing mitochondrial dysfunction and mitophagy in gemcitabine-resistant pancreatic cancer cells.
PMID: 40055335
Cell Death Dis · 2025
0.90
3
The human osmoregulatory Na+/myo-inositol cotransporter gene (SLC5A3): molecular cloning and localization to chromosome 21.
PMID: 7789985
Genomics · 1995
0.80
4
The structural organization of the human Na+/myo-inositol cotransporter (SLC5A3) gene and characterization of the promoter.
PMID: 9441750
Genomics · 1997
0.70
5
Glucose and Inositol Transporters, SLC5A1 and SLC5A3, in Glioblastoma Cell Migration.
PMID: 36497276
Cancers (Basel) · 2022
0.60