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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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SLC6A7
solute carrier family 6 member 7
Chromosome 5 · 5q32
NCBI Gene: 6534Ensembl: ENSG00000011083.9HGNC: HGNC:11054UniProt: Q99884
15PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein catabolic processL-proline transmembrane transporter activitysynapseproline:sodium symporter activityneurodegenerative diseaseinflammatory bowel diseaseperipheral vascular diseaseulcerative colitis
✦AI Summary

SLC6A7 encodes a brain-specific sodium and chloride-dependent proline transporter that terminates proline neurotransmitter action through high-affinity reuptake into presynaptic terminals 1. The protein functions as an L-proline transmembrane transporter with proline:sodium symporter activity, facilitating neurotransmitter transport across plasma membranes. Disease relevance includes associations with asthma susceptibility, where polymorphisms in the SLC6A7 gene significantly correlate with asthma risk and bronchodilator response 2. Loss-of-function variants contribute to complex neurodevelopmental disorders characterized by severe dystonia, developmental delay, and motor dysfunction 1. Functional studies demonstrate that SLC6A7 variants cause decreased proline transport due to reduced cell-surface expression, and zebrafish knockdown models exhibit developmental delays and fragile motor neuron morphology 1. Additionally, SLC6A7 shows potential interactions with other SLC6 family transporters, suggesting broader pharmacological targets 3. The gene may also play roles in cellular proliferation and migration, as demonstrated in chordate models where SLC6A7 overexpression significantly suppressed cell growth and migration 4. Clinical significance extends to potential involvement in rotator cuff pathology and cervical cancer progression 56.

Sources cited
1
SLC6A7 encodes a brain-specific proline transporter and loss-of-function variants cause neurodevelopmental disorders with dystonia
PMID: 35876425
2
SLC6A7 polymorphisms are significantly associated with asthma susceptibility and bronchodilator response
PMID: 20431603
3
SLC6A7 shows potential interactions with other SLC6 family transporters
PMID: 38982944
4
SLC6A7 overexpression suppresses cell proliferation and migration in chordate models
PMID: 31026570
5
SLC6A7 expression differs between traumatic and degenerative rotator cuff tears
PMID: 35266580
6
SLC6A7 is associated with cervical cancer progression
PMID: 39759304
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.32Weak
inflammatory bowel diseaseOpen Targets
0.22Weak
peripheral vascular diseaseOpen Targets
0.16Weak
ulcerative colitisOpen Targets
0.12Weak
emphysemaOpen Targets
0.07Suggestive
lung cancerOpen Targets
0.07Suggestive
dengue diseaseOpen Targets
0.05Suggestive
central nervous system cancerOpen Targets
0.05Suggestive
Barrett's esophagusOpen Targets
0.04Suggestive
neoplasmOpen Targets
0.04Suggestive
urinary bladder carcinomaOpen Targets
0.04Suggestive
breast cancerOpen Targets
0.04Suggestive
esophageal adenocarcinomaOpen Targets
0.03Suggestive
ThrombocytopeniaOpen Targets
0.02Suggestive
Nijmegen breakage syndromeOpen Targets
0.02Suggestive
infectionOpen Targets
0.02Suggestive
gestational diabetesOpen Targets
0.02Suggestive
cancerOpen Targets
0.02Suggestive
Insulin resistanceOpen Targets
0.02Suggestive
atherosclerosisOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
HELTProtein interaction80%PTMAProtein interaction77%SLC6A5Shared pathway43%SLC6A20Shared pathway40%SLC6A9Shared pathway30%SLC6A16Shared pathway29%
Tissue Expression6 tissues
Brain
100%
Lung
2%
Ovary
1%
Liver
1%
Bone Marrow
1%
Heart
0%
Gene Interaction Network
Click a node to explore
SLC6A7HELTPTMASLC6A5SLC6A20SLC6A9SLC6A16
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q99884
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.01LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.81 [0.66–1.01]
RankingsWhere SLC6A7 stands among ~20K protein-coding genes
  • #15,695of 20,598
    Most Researched15
  • #9,924of 17,882
    Most Constrained (LOEUF)1.01
Genes detectedSLC6A7
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
PMID: 35114907
Am J Chin Med · 2022
1.00
2
A new association between polymorphisms of the SLC6A7 gene in the chromosome 5q31-32 region and asthma.
PMID: 20431603
J Hum Genet · 2010
0.90
3
MED27, SLC6A7, and MPPE1 Variants in a Complex Neurodevelopmental Disorder with Severe Dystonia.
PMID: 35876425
Mov Disord · 2022
0.80
4
In silico evidence of bitopertin's broad interactions within the SLC6 transporter family.
PMID: 38982944
J Pharm Pharmacol · 2024
0.70
5
CENPE is a diagnostic and prognostic biomarker for cervical cancer.
PMID: 39759304
Heliyon · 2024
0.60