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10 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
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SMYD5
SMYD family member 5
Chromosome 2 · 2p13.2
NCBI Gene: 10322Ensembl: ENSG00000135632.13HGNC: HGNC:16258UniProt: Q6GMV2
27PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingprotein-lysine N-methyltransferase activitytransposable element silencing by heterochromatin formationpositive regulation of cytoplasmic translational elongationneoplasmhepatocellular carcinomainflammatory bowel diseaselung cancer
✦AI Summary

SMYD5 is a protein-lysine methyltransferase with dual roles in ribosomal translation and epigenetic regulation. Its primary function is catalyzing trimethylation of lysine-22 on ribosomal protein RPL40 (rpL40K22me3), which enhances translation elongation and protein synthesis output 12. This ribosomal methylation activity promotes malignant progression in gastric adenocarcinoma and hepatocellular carcinoma by reprogramming oncogenic protein synthesis 12. SMYD5 also functions as a histone methyltransferase, catalyzing H3K36me3 and H4K20me3 formation to regulate gene expression and maintain genome stability in embryonic stem cells 3. Disease relevance is substantial across multiple pathologies. In cancer, SMYD5 upregulation correlates with poor prognosis in HCC and GAC; SMYD5 depletion blocks metastatic disease and sensitizes tumors to PI3K-mTOR inhibitors 124. In rheumatoid arthritis, SMYD5 promotes fibroblast proliferation and inflammation by methylating FoxO1 and upregulating HK2-mediated glycolysis 5. SMYD5 exacerbates inflammatory bowel disease by methylating PGC-1α, accelerating its degradation and impairing mitochondrial biogenesis in intestinal epithelia 6. SMYD5 also regulates the hypothermia response by repressing the neuroprotective gene SP1 through H3K36me3 7. Clinically, SMYD5 represents a therapeutic target; its inhibition combined with immunotherapy or mTOR inhibitors shows promise in cancer and inflammatory disease models.

Sources cited
1
SMYD5 catalyzes rpL40K22me3 to promote gastric adenocarcinoma progression; SMYD5 depletion blocks metastatic disease
PMID: 39048817
2
SMYD5 catalyzes RPL40 K22me3 to enhance translation elongation; upregulated in HCC and correlates with poor prognosis
PMID: 39103523
3
SMYD5 maintains ES cell genome stability through H4K20me3 marks during differentiation
PMID: 28951459
4
SMYD5 upregulation in HCC associated with high grade, stage, and poor prognosis; silencing enhances drug sensitivity
PMID: 35218722
5
SMYD5 promotes FLS proliferation and inflammation in RA by methylating FoxO1 and upregulating HK2
PMID: 40165083
6
SMYD5 exacerbates IBD by methylating PGC-1α, facilitating its degradation and impairing mitochondrial biogenesis
PMID: 35643234
7
SMYD5 regulates hypothermia response by repressing SP1 through H3K36me3 and regulates 37 temperature-dependent genes
PMID: 39083378
Disease Associationsⓘ20
neoplasmOpen Targets
0.09Suggestive
hepatocellular carcinomaOpen Targets
0.08Suggestive
inflammatory bowel diseaseOpen Targets
0.08Suggestive
lung cancerOpen Targets
0.08Suggestive
rheumatoid arthritisOpen Targets
0.06Suggestive
intelligenceOpen Targets
0.06Suggestive
cancerOpen Targets
0.05Suggestive
osteomyelitisOpen Targets
0.05Suggestive
colitisOpen Targets
0.03Suggestive
rectosigmoid junction neoplasmOpen Targets
0.02Suggestive
breast cancerOpen Targets
0.02Suggestive
head and neck squamous cell carcinomaOpen Targets
0.02Suggestive
liver and intrahepatic bile duct neoplasmOpen Targets
0.01Suggestive
Neoplasm of the liverOpen Targets
0.01Suggestive
arthritisOpen Targets
0.01Suggestive
chronic obstructive pulmonary diseaseOpen Targets
0.01Suggestive
gastric adenocarcinomaOpen Targets
0.01Suggestive
gastric cancerOpen Targets
0.01Suggestive
colorectal carcinomaOpen Targets
0.01Suggestive
ThymomaOpen Targets
0.01Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SMYD4Protein interaction85%SMYD1Protein interaction77%TASORShared pathway33%PPHLN1Shared pathway33%MPHOSPH8Shared pathway29%RESF1Shared pathway25%
Tissue Expression6 tissues
Ovary
100%
Heart
89%
Bone Marrow
67%
Liver
62%
Lung
44%
Brain
40%
Gene Interaction Network
Click a node to explore
SMYD5SMYD4SMYD1TASORPPHLN1MPHOSPH8RESF1
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q6GMV2
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.83LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.62 [0.46–0.83]
RankingsWhere SMYD5 stands among ~20K protein-coding genes
  • #12,679of 20,598
    Most Researched27
  • #7,143of 17,882
    Most Constrained (LOEUF)0.83
Genes detectedSMYD5
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
SMYD5 methylation of rpL40 links ribosomal output to gastric cancer.
PMID: 39048817
Nature · 2024
1.00
2
SMYD5 is a ribosomal methyltransferase that catalyzes RPL40 lysine methylation to enhance translation output and promote hepatocellular carcinoma.
PMID: 39103523
Cell Res · 2024
0.90
3
Novel regulation mechanism of histone methyltransferase SMYD5 in rheumatoid arthritis.
PMID: 40165083
Cell Mol Biol Lett · 2025
0.80
4
Epithelial SMYD5 Exaggerates IBD by Down-regulating Mitochondrial Functions via Post-Translational Control of PGC-1α Stability.
PMID: 35643234
Cell Mol Gastroenterol Hepatol · 2022
0.70
5
SMYD5 is a regulator of the mild hypothermia response.
PMID: 39083378
Cell Rep · 2024
0.60