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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
SP7
Sp7 transcription factor
Chromosome 12 Β· 12q13.13
NCBI Gene: 121340Ensembl: ENSG00000170374.6HGNC: HGNC:17321UniProt: Q8TDD2
94PubMed Papers
21Diseases
0Drugs
3Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
protein bindingpositive regulation of transcription by RNA polymerase IIhematopoietic stem cell differentiationpositive regulation of stem cell differentiationosteogenesis imperfectaosteogenesis imperfecta, recessiveskeletal dysplasiacraniodiaphyseal dysplasia
✦AI Summary

SP7 (Sp7 transcription factor) is a critical transcriptional activator essential for osteoblast differentiation and bone formation 1. SP7 functions downstream of RUNX2, which induces SP7 expression to convert RUNX2+ osteoprogenitors into RUNX2+SP7+ preosteoblasts 12. SP7 then drives the differentiation of preosteoblasts into mature osteoblasts without enhancing their proliferation 1. The transcription factor binds to G/C-rich DNA sequences and regulates major bone matrix protein genes including Col1a1 1. Beyond its canonical role in osteoblast differentiation, SP7 has been identified to control osteocyte dendrite formation through its target gene osteocrin 3. SP7 is necessary for osteocytes to acquire sufficient cellular processes, and reduction of these processes results in osteocyte apoptosis and cortical porosity 2. Mutations in SP7 cause osteogenesis imperfecta in rare cases, with defective osteocyte morphology observed in humans carrying SP7R316C mutation 31. Recent genome-scale analyses have revealed both canonical and non-canonical modes of SP7 action, identifying additional target genes and upstream regulatory factors that control skeletal development and maintenance 4.

Sources cited
1
SP7 is essential for osteoblast differentiation, functions downstream of RUNX2, and converts preosteoblasts to osteoblasts
PMID: 39337587
2
RUNX2 induces SP7 expression and SP7 is needed for osteocyte process formation
PMID: 39352550
3
SP7 controls osteocyte dendrite formation through osteocrin and SP7R316C mutation causes defective osteocyte morphology
PMID: 34725346
4
Recent genome-scale analyses revealed canonical and non-canonical modes of SP7 action
PMID: 35628456
⚠Limited data available β€” This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜21
osteogenesis imperfectaOpen Targets
0.55Moderate
osteogenesis imperfecta, recessiveOpen Targets
0.41Moderate
skeletal dysplasiaOpen Targets
0.37Weak
craniodiaphyseal dysplasiaOpen Targets
0.37Weak
osteogenesis imperfecta type 4Open Targets
0.37Weak
osteoporosisOpen Targets
0.23Weak
bone diseaseOpen Targets
0.14Weak
neoplasmOpen Targets
0.11Weak
atrial fibrillationOpen Targets
0.11Weak
breast cancerOpen Targets
0.10Suggestive
obesityOpen Targets
0.06Suggestive
spondylometaphyseal dysplasia, A4 typeOpen Targets
0.05Suggestive
osteosarcomaOpen Targets
0.04Suggestive
odontochondrodysplasia 1Open Targets
0.04Suggestive
kyphomelic dysplasiaOpen Targets
0.04Suggestive
metatropic dysplasiaOpen Targets
0.04Suggestive
Metaphyseal chondrodysplasia, Schmid typeOpen Targets
0.04Suggestive
Schmid metaphyseal chondrodysplasiaOpen Targets
0.04Suggestive
hypospadiasOpen Targets
0.04Suggestive
diaphanospondylodysostosisOpen Targets
0.04Suggestive
Osteogenesis imperfecta 12UniProt
Pathogenic Variants3
NM_001173467.3(SP7):c.810C>A (p.Cys270Ter)Likely pathogenic
Osteogenesis imperfecta type 12
β˜…β˜†β˜†β˜†2024β†’ Residue 270
NM_001173467.3(SP7):c.359_362del (p.Asp120fs)Likely pathogenic
Osteogenesis imperfecta type 12
β˜†β˜†β˜†β˜†2023β†’ Residue 120
NM_001173467.3(SP7):c.1052del (p.Glu351fs)Pathogenic
not provided|Osteogenesis imperfecta type 12
β˜†β˜†β˜†β˜†2010β†’ Residue 351
View on ClinVar β†—
Related Genes
COL1A2Protein interaction100%CTNNB1Protein interaction98%RIOX1Protein interaction92%MSX2Protein interaction88%SPP1Protein interaction88%ALPLProtein interaction88%
Tissue Expression6 tissues
Brain
100%
Bone Marrow
50%
Ovary
11%
Liver
0%
Lung
0%
Heart
0%
Gene Interaction Network
Click a node to explore
SP7COL1A2CTNNB1RIOX1MSX2SPP1ALPL
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted Β· UniProt Q8TDD2
View on AlphaFold β†—
Constraintβ“˜
LOEUFβ“˜
0.81LoF Tolerant
pLIβ“˜
0.03Tolerant
Observed/Expected LoF0.50 [0.32–0.81]
RankingsWhere SP7 stands among ~20K protein-coding genes
  • #5,109of 20,598
    Most Researched94 Β· top quartile
  • #3,994of 5,498
    Most Pathogenic Variants3
  • #6,764of 17,882
    Most Constrained (LOEUF)0.81
Genes detectedSP7
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Regulation of Proliferation, Differentiation and Functions of Osteoblasts by Runx2.
PMID: 30987410
Int J Mol Sci Β· 2019
1.00
2
Control of osteocyte dendrite formation by Sp7 and its target gene osteocrin.
PMID: 34725346
Nat Commun Β· 2021
0.90
3
Regulation of Skeletal Development and Maintenance by Runx2 and Sp7.
PMID: 39337587
Int J Mol Sci Β· 2024
0.80
4
SP7: from Bone Development to Skeletal Disease.
PMID: 36881265
Curr Osteoporos Rep Β· 2023
0.70
5
Bone development by Hedgehog and Wnt signaling, Runx2, and Sp7.
PMID: 39352550
J Bone Miner Metab Β· 2025
0.60