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SPART
spartin
Chromosome 13 Β· 13q13.3
NCBI Gene: 23111Ensembl: ENSG00000133104.15HGNC: HGNC:18514UniProt: A0A024RDV9
135PubMed Papers
21Diseases
0Drugs
28Pathogenic Variants
FUNCTIONAL ROLE
Transporter
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
regulation of mitochondrial membrane potentialprotein bindinglipid bindingubiquitin protein ligase bindingTroyer syndromeNeurodevelopmental delaygenetic disordereye disease
✦AI Summary

AI summary not yet available. Showing NCBI Gene summary.

spartin

⚠Limited data available β€” This gene has 0 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜21
Troyer syndromeOpen Targets
0.81Strong
Neurodevelopmental delayOpen Targets
0.45Moderate
genetic disorderOpen Targets
0.42Moderate
eye diseaseOpen Targets
0.28Weak
Global developmental delayOpen Targets
0.26Weak
cerebellar ataxiaOpen Targets
0.26Weak
DysarthriaOpen Targets
0.26Weak
Failure to thriveOpen Targets
0.26Weak
microcephalyOpen Targets
0.26Weak
StrabismusOpen Targets
0.26Weak
retinopathyOpen Targets
0.24Weak
retinoschisisOpen Targets
0.24Weak
hereditary spastic paraplegiaOpen Targets
0.19Weak
response to antihypertensive drugOpen Targets
0.19Weak
gastric cancerOpen Targets
0.07Suggestive
Rare genetic vascular diseaseOpen Targets
0.06Suggestive
neoplasmOpen Targets
0.05Suggestive
familial thoracic aortic aneurysm and aortic dissectionOpen Targets
0.05Suggestive
MODYOpen Targets
0.04Suggestive
aortic aneurysm, familial thoracic 7Open Targets
0.04Suggestive
Spastic paraplegia 20, autosomal recessiveUniProt
Pathogenic Variants28
NM_015087.5(SPART):c.696dup (p.Val233fs)Pathogenic
Troyer syndrome|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 233
NM_015087.5(SPART):c.364_365del (p.Met122fs)Pathogenic
Troyer syndrome|not provided|Inborn genetic diseases|Neurodevelopmental delay
β˜…β˜…β˜†β˜†2024β†’ Residue 122
NM_015087.5(SPART):c.1474_1477del (p.Gln492fs)Pathogenic
Troyer syndrome|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 492
NM_015087.5(SPART):c.776del (p.Asp259fs)Pathogenic
not provided|SPART-related disorder
β˜…β˜…β˜†β˜†2024β†’ Residue 259
NM_015087.5(SPART):c.1369C>T (p.Arg457Ter)Pathogenic
not provided|Troyer syndrome|Neurodevelopmental delay
β˜…β˜…β˜†β˜†2023β†’ Residue 457
NM_015087.5(SPART):c.1110del (p.Lys370fs)Pathogenic
Troyer syndrome|not provided|SPART-related disorder
β˜…β˜…β˜†β˜†2023β†’ Residue 370
NM_015087.5(SPART):c.696del (p.Phe232fs)Pathogenic
not provided
β˜…β˜…β˜†β˜†2023β†’ Residue 232
NM_015087.5(SPART):c.1294del (p.Ser432fs)Pathogenic
not provided|Troyer syndrome
β˜…β˜…β˜†β˜†2022β†’ Residue 432
NM_015087.5(SPART):c.853_856del (p.Pro284_Val285insTer)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 284
NM_015087.5(SPART):c.1483+1G>ALikely pathogenic
not provided
β˜…β˜†β˜†β˜†2025
NM_015087.5(SPART):c.1008+1G>CLikely pathogenic
not provided
β˜…β˜†β˜†β˜†2025
NM_015087.5(SPART):c.844_847del (p.Arg282fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 282
NM_015087.5(SPART):c.1257G>A (p.Trp419Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 419
NM_015087.5(SPART):c.253_254del (p.Leu85fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 85
NM_015087.5(SPART):c.1324G>C (p.Ala442Pro)Likely pathogenic
Troyer syndrome
β˜…β˜†β˜†β˜†2024β†’ Residue 442
NM_015087.5(SPART):c.1738G>T (p.Gly580Ter)Likely pathogenic
Troyer syndrome
β˜…β˜†β˜†β˜†2023β†’ Residue 580
NM_015087.5(SPART):c.885dup (p.Pro296fs)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2022β†’ Residue 296
NM_015087.5(SPART):c.894_898del (p.Met299fs)Pathogenic
Troyer syndrome
β˜…β˜†β˜†β˜†2022β†’ Residue 299
NM_015087.5(SPART):c.553_554del (p.Val185fs)Pathogenic
not provided
β˜…β˜†β˜†β˜†2022β†’ Residue 185
NM_015087.5(SPART):c.592G>T (p.Gly198Ter)Likely pathogenic
Troyer syndrome
β˜…β˜†β˜†β˜†2022β†’ Residue 198
View on ClinVar β†—
Related Genes
IST1Protein interaction96%EPS15Protein interaction96%SPG11Protein interaction95%KIR2DL1Protein interaction88%KIR3DL1Protein interaction88%STACProtein interaction88%
Tissue Expression6 tissues
Ovary
100%
Bone Marrow
63%
Heart
59%
Lung
53%
Brain
51%
Liver
22%
Gene Interaction Network
Click a node to explore
SPARTIST1EPS15SPG11KIR2DL1KIR3DL1STAC
PROTEIN STRUCTURE
Preparing viewer…
PDB4U7I Β· 1.79 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.76LoF Tolerant
pLIβ“˜
0.00Tolerant
Observed/Expected LoF0.58 [0.44–0.76]
RankingsWhere SPART stands among ~20K protein-coding genes
  • #3,438of 20,598
    Most Researched135 Β· top quartile
  • #1,869of 5,498
    Most Pathogenic Variants28
  • #6,063of 17,882
    Most Constrained (LOEUF)0.76
Genes detectedSPART
Sources retrieved0 papers
Response timeβ€”