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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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SPATC1
spermatogenesis and centriole associated 1
Chromosome 8 · 8q24.3
NCBI Gene: 375686Ensembl: ENSG00000186583.12HGNC: HGNC:30510UniProt: A0A140VJV4
8PubMed Papers
19Diseases
0Drugs
0Pathogenic Variants
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
centrosomecytoplasmCrohn's diseaseAlzheimer diseaseasthmavenous thromboembolism
✦AI Summary

SPATC1 (spermatogenesis and centriole associated 1) is a centrosomal protein with primary roles in spermatogenesis and male reproductive function. The gene localizes to the centrosome, the microtubule organizing center critical for cellular division and cilia formation 1. SPATC1 is upregulated during sexual maturation in males, correlating with enhanced sperm fertility 2. At the molecular level, SPATC1 is a direct transcriptional target of the BNC1/TAF7L complex, which regulates spermatogenesis-specific gene expression 3. The gene is sensitive to environmental and physiological stress; cigarette smoke exposure altered SPATC1 expression in sperm 4, and hypothalamic ghrelin signaling during metabolic stress decreased SPATC1 expression, impairing sperm quality and embryo development 5. SPATC1 is also associated with sex determination pathways, as it is regulated by lncRNAs controlling testis-dominant genes and spermatogenesis 6. Additionally, genetic variation in SPATC1 (rs60050811) shows associations with sun protection behaviors in childhood 7. Clinically, SPATC1 dysfunction may contribute to male infertility through defective spermatogenesis, while SPATC1 alterations represent potential biomarkers for reproductive health assessment.

Sources cited
1
SPATC1 localizes to the centrosome and gain-of-function alterations may cause centrosome amplification in cancer
PMID: 32681070
2
SPATC1 is upregulated in sexually mature male macaques and correlates with stronger sperm fertility
PMID: 37286946
3
SPATC1 is a direct transcriptional target of BNC1/TAF7L complex regulating spermatogenesis
PMID: 31065688
4
SPATC1 expression is altered in sperm of mice exposed to cigarette smoke
PMID: 26063603
5
Hypothalamic ghrelin administration decreases SPATC1 expression and impairs sperm quality in male mice
PMID: 36322468
6
SPATC1 is regulated by lncRNAs controlling genes involved in sex determination and spermatogenesis
PMID: 35709667
7
SPATC1 SNP rs60050811 is associated with sun cream usage in children
PMID: 29649967
Disease Associationsⓘ19
Crohn's diseaseOpen Targets
0.09Suggestive
Alzheimer diseaseOpen Targets
0.07Suggestive
asthmaOpen Targets
0.05Suggestive
venous thromboembolismOpen Targets
0.05Suggestive
hypoparathyroidism, familial isolated, 2Open Targets
0.04Suggestive
SepsisOpen Targets
0.04Suggestive
pseudohypoparathyroidism type 2Open Targets
0.04Suggestive
familial isolated hypoparathyroidism due to agenesis of parathyroid glandOpen Targets
0.03Suggestive
ulcerative colitisOpen Targets
0.02Suggestive
bipolar disorderOpen Targets
0.02Suggestive
LeishmaniasisOpen Targets
0.02Suggestive
breast cancerOpen Targets
0.01Suggestive
neoplasmOpen Targets
0.00Suggestive
systemic juvenile idiopathic arthritisOpen Targets
0.00Suggestive
male infertilityOpen Targets
0.00Suggestive
gastric cancerOpen Targets
0.00Suggestive
thyroid cancer, nonmedullary, 1Open Targets
0.00Suggestive
urinary bladder cancerOpen Targets
0.00Suggestive
urinary bladder carcinomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
CDC27Protein interaction100%ODF1Protein interaction89%CDC20Protein interaction75%PCNTProtein interaction71%CNTLNProtein interaction71%NUP85Protein interaction71%
Tissue Expression6 tissues
Bone Marrow
100%
Lung
8%
Liver
7%
Ovary
1%
Brain
0%
Heart
0%
Gene Interaction Network
Click a node to explore
SPATC1CDC27ODF1CDC20PCNTCNTLNNUP85
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q76KD6
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
1.28LoF Tolerant
pLIⓘ
0.00Tolerant
Observed/Expected LoF0.97 [0.75–1.28]
RankingsWhere SPATC1 stands among ~20K protein-coding genes
  • #17,720of 20,598
    Most Researched8
  • #13,514of 17,882
    Most Constrained (LOEUF)1.28
Genes detectedSPATC1
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Alteration of sperm protein profile induced by cigarette smoking.
PMID: 26063603
Acta Biochim Biophys Sin (Shanghai) · 2015
1.00
2
Influence of maternal and own genotype at tanning dependence-related SNPs on sun exposure in childhood.
PMID: 29649967
BMC Med Genet · 2018
0.90
3
Multi-omics analysis reveals changes in tryptophan and cholesterol metabolism before and after sexual maturation in captive macaques.
PMID: 37286946
BMC Genomics · 2023
0.80
4
Basonuclin 1 deficiency causes testicular premature aging: BNC1 cooperates with TAF7L to regulate spermatogenesis.
PMID: 31065688
J Mol Cell Biol · 2020
0.70
5
Role of the hypothalamus in ghrelin effects on reproduction: sperm function and sexual behavior in male mice.
PMID: 36322468
Reproduction · 2023
0.60