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GeneE
10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
β“˜GeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
SPTB
spectrin beta, erythrocytic
Chromosome 14 Β· 14q23.3
NCBI Gene: 6710Ensembl: ENSG00000070182.22HGNC: HGNC:11274UniProt: P11277
136PubMed Papers
22Diseases
0Drugs
557Pathogenic Variants
FUNCTIONAL ROLE
Highly Constrained
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
actin filament bindingspectrin-associated cytoskeletonprotein-containing complexprotein bindinghereditary elliptocytosishereditary spherocytosishemolytic anemiaCongenital hemolytic anemia
✦AI Summary

SPTB (spectrin beta, erythrocytic) encodes a critical cytoskeletal protein that forms the structural foundation of the erythrocyte plasma membrane 1. As a major constituent of the cytoskeletal network, SPTB associates with band 4.1 and actin to create the cytoskeletal superstructure underlying the red blood cell membrane, enabling proper localization of essential membrane proteins and maintaining cellular architecture 1. SPTB functions as part of the spectrin complex, assembled from Ξ± and Ξ² subunits that bind to cytoskeletal elements and the plasma membrane to facilitate cellular scaffolding 1. Pathogenic variants in SPTB are primarily associated with erythroid cell disorders, most notably hereditary spherocytosis (HS), one of the most common hereditary hemolytic disorders 23. SPTB mutations cause HS through various mechanisms, including nonsense-mediated mRNA degradation leading to reduced gene expression and premature protein truncation 3. The resulting cytoskeletal dysfunction leads to increased generation of red blood cell microparticles and hemolysis 3. Clinically, SPTB sequencing is used for genetic diagnosis of HS and identification of causative variants enables appropriate genetic counseling and understanding of hereditary hemolytic disease pathogenesis 2. Additionally, SPTB expression serves as a blood-specific biomarker for forensic body fluid identification 4.

Sources cited
1
SPTB encodes spectrin Ξ² subunit; spectrins bind cytoskeletal elements and plasma membrane for protein localization, signal transduction, and cellular scaffolding; pathogenic variants in SPTB cause erythroid cell disorders
PMID: 33847457
2
SPTB mutations cause hereditary spherocytosis; novel splice variants in SPTB identified in HS patients; SPTB variant spectrum important for genetic diagnosis and counseling
PMID: 39135028
3
SPTB mutations are common causes of hereditary spherocytosis; SPTB mutations generate premature stop codons causing reduced mRNA expression via nonsense-mediated degradation; HS patients have elevated red blood cell microparticles
PMID: 39521890
4
SPTB (beta-spectrin) serves as a blood-specific biomarker gene for body fluid identification by quantitative RT-PCR
PMID: 17868268
⚠Limited data available β€” This gene has 4 indexed publications. Summary and analysis may be incomplete.
Disease Associationsβ“˜22
hereditary elliptocytosisOpen Targets
0.79Strong
hereditary spherocytosisOpen Targets
0.76Strong
hemolytic anemiaOpen Targets
0.67Moderate
Congenital hemolytic anemiaOpen Targets
0.61Moderate
hematologic diseaseOpen Targets
0.59Moderate
splenic diseaseOpen Targets
0.57Moderate
SpherocytosisOpen Targets
0.54Moderate
immune system diseaseOpen Targets
0.49Moderate
PyropoikilocytosisOpen Targets
0.38Weak
pyropoikilocytosis, hereditaryOpen Targets
0.38Weak
anemiaOpen Targets
0.34Weak
Chudley-McCullough syndromeOpen Targets
0.34Weak
hereditary spherocytosis type 3Open Targets
0.28Weak
chronic hepatitisOpen Targets
0.23Weak
genetic disorderOpen Targets
0.19Weak
ThrombophlebitisOpen Targets
0.16Weak
PhlebitisOpen Targets
0.16Weak
familial hemolytic anemiaOpen Targets
0.15Weak
preterm premature rupture of the membranesOpen Targets
0.11Weak
Blackfan-Diamond anemiaOpen Targets
0.11Weak
Elliptocytosis 3UniProt
Spherocytosis 2UniProt
Pathogenic Variants557
NM_001355436.2(SPTB):c.1064+1G>APathogenic
not provided
β˜…β˜…β˜†β˜†2026
NM_001355436.2(SPTB):c.1A>G (p.Met1Val)Pathogenic
Hereditary spherocytosis type 2|not specified|not provided
β˜…β˜…β˜†β˜†2026β†’ Residue 1
NM_001355436.2(SPTB):c.4735C>T (p.Arg1579Ter)Pathogenic
not provided|Hereditary spherocytosis type 2
β˜…β˜…β˜†β˜†2026β†’ Residue 1579
NM_001355436.2(SPTB):c.3916C>T (p.Arg1306Ter)Pathogenic
Hereditary spherocytosis type 2|not provided
β˜…β˜…β˜†β˜†2026β†’ Residue 1306
NM_001355436.2(SPTB):c.4627C>T (p.Gln1543Ter)Pathogenic
not provided|SPTB-related disorder
β˜…β˜…β˜†β˜†2026β†’ Residue 1543
NM_001355436.2(SPTB):c.1146_1147del (p.His384fs)Pathogenic
not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 384
NM_001355436.2(SPTB):c.5266C>T (p.Arg1756Ter)Pathogenic
Hereditary spherocytosis type 2|not provided|Elliptocytosis 3;Hereditary spherocytosis type 2
β˜…β˜…β˜†β˜†2025β†’ Residue 1756
NM_001355436.2(SPTB):c.85G>T (p.Glu29Ter)Pathogenic
Hereditary spherocytosis type 2|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 29
NM_001355436.2(SPTB):c.4973+5G>APathogenic
Hereditary spherocytosis type 2|not provided
β˜…β˜…β˜†β˜†2025
NM_001355436.2(SPTB):c.6055T>C (p.Ser2019Pro)Pathogenic
Elliptocytosis 3|Hereditary spherocytosis type 2|not provided|SPTB-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 2019
NM_001355436.2(SPTB):c.208C>T (p.Arg70Ter)Pathogenic
not provided|SPTB-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 70
NM_001355436.2(SPTB):c.3304C>T (p.Gln1102Ter)Likely pathogenic
not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 1102
NM_001355436.2(SPTB):c.2092C>T (p.Gln698Ter)Pathogenic
not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 698
NM_001355436.2(SPTB):c.647G>A (p.Arg216Gln)Pathogenic
Hereditary spherocytosis type 2|not provided|Elliptocytosis 3;Hereditary spherocytosis type 2|SPTB-related disorder
β˜…β˜…β˜†β˜†2025β†’ Residue 216
NM_001355436.2(SPTB):c.3764+1G>APathogenic
not provided|Hereditary spherocytosis type 2
β˜…β˜…β˜†β˜†2025
NM_001355436.2(SPTB):c.2863C>T (p.Arg955Ter)Pathogenic
Hereditary spherocytosis type 2|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 955
NM_001355436.2(SPTB):c.1324C>T (p.Gln442Ter)Pathogenic
not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 442
NM_001355436.2(SPTB):c.4732C>T (p.Gln1578Ter)Pathogenic
not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 1578
NM_001355436.2(SPTB):c.1456C>T (p.Gln486Ter)Pathogenic
not provided|Hereditary spherocytosis type 2
β˜…β˜…β˜†β˜†2025β†’ Residue 486
NM_001355436.2(SPTB):c.4291C>T (p.Arg1431Ter)Pathogenic
not provided|Hereditary spherocytosis type 2|Chudley-McCullough syndrome
β˜…β˜…β˜†β˜†2025β†’ Residue 1431
View on ClinVar β†—
Related Genes
ANK1Protein interaction100%ANK2Protein interaction100%ANK3Protein interaction100%EPB41Protein interaction100%SPTAN1Protein interaction100%SPTBN4Protein interaction97%
Tissue Expression6 tissues
Heart
100%
Bone Marrow
80%
Brain
20%
Lung
6%
Ovary
1%
Liver
1%
Gene Interaction Network
Click a node to explore
SPTBANK1ANK2ANK3EPB41SPTAN1SPTBN4
PROTEIN STRUCTURE
Preparing viewer…
PDB3EDU Β· 2.10 Γ… Β· X-ray
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.23Highly Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.18 [0.14–0.23]
RankingsWhere SPTB stands among ~20K protein-coding genes
  • #3,416of 20,598
    Most Researched136 Β· top quartile
  • #92of 5,498
    Most Pathogenic Variants557 Β· top 5%
  • #624of 17,882
    Most Constrained (LOEUF)0.23 Β· top 5%
Genes detectedSPTB
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Heterozygous variants in SPTBN1 cause intellectual disability and autism.
PMID: 33847457
Am J Med Genet A Β· 2021
1.00
2
mRNA profiling for body fluid identification by multiplex quantitative RT-PCR.
PMID: 17868268
J Forensic Sci Β· 2007
0.90
3
A novel variant in the SPTB gene underlying hereditary spherocytosis and a literature review of previous variants.
PMID: 39135028
BMC Med Genomics Β· 2024
0.80
4
Cervical alterations in pregnancy.
PMID: 30314740
Best Pract Res Clin Obstet Gynaecol Β· 2018
0.70
5
Correlation between human papillomavirus infection and reproduction.
PMID: 35419800
Ginekol Pol Β· 2022
0.60