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10 sources retrieved Β· Most recent: April 2026 Β· Index updated 14 days ago
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SPTBN2
spectrin beta, non-erythrocytic 2
Chromosome 11 Β· 11q13.2
NCBI Gene: 6712Ensembl: ENSG00000173898.16HGNC: HGNC:11276UniProt: A0A087WYQ1
127PubMed Papers
22Diseases
0Drugs
56Pathogenic Variants
RESEARCH IMPACT
Variant-Rich
CLINICAL
OMIM Disease Gene
DATA QUALITY
βœ“ Experimental GO Evidenceβœ“ Swiss-Prot Reviewed
spectrinvesicle-mediated transportGO:0005615cytosolspinocerebellar ataxia type 5autosomal recessive spinocerebellar ataxia 14Spectrin-associated autosomal recessive cerebellar ataxiagenetic disorder
✦AI Summary

SPTBN2 encodes a non-erythrocytic spectrin beta subunit that functions as a critical component of the neuronal membrane skeleton 1. As part of the spectrin heterotetrameric complex, SPTBN2 binds cytoskeletal elements and the plasma membrane to facilitate proper localization of essential membrane proteins, signal transduction, and cellular scaffolding 1. Beyond its structural role, SPTBN2 facilitates vesicle-mediated transport and membrane protein trafficking through its CH domain interactions, as demonstrated by its role in positioning SLC7A11 on the cell membrane in lung cancer cells 2. Disease relevance centers on neurological spectrinopathies. Pathogenic SPTBN2 variants cause spinocerebellar ataxia type 5 (SCA5) and autosomal recessive spinocerebellar ataxia 14, with heterozygous variants producing early-onset disease featuring severe cerebellar atrophy and developmental delay 34. SPTBN2 mutations rank among the six most commonly identified genes in ataxia patients, accounting for >40% of molecular diagnoses in targeted exome studies 5. Recent evidence suggests SPTBN2 also suppresses ferroptosis in non-small cell lung cancer by maintaining SLC7A11-mediated cystine uptake, positioning it as a potential oncology therapeutic target 26. Clinically, SPTBN2 variants demonstrate extreme phenotypic heterogeneity, with both infantile-onset and adult-onset presentations depending on variant type and protein charge changes, complicating genotype-phenotype prediction 4.

Sources cited
1
Spectrins bind cytoskeletal elements and plasma membrane to facilitate membrane protein localization, signal transduction, and cellular scaffolding; SPTBN2 variants are associated with neurologic disorders
PMID: 33847457
2
SPTBN2 facilitates SLC7A11 membrane trafficking and localization through its CH domain to suppress ferroptosis in NSCLC cells
PMID: 38241838
3
Novel SPTBN2 mutations and intragenic deletions cause early-onset SCA5 with severe cerebellar atrophy and developmental delay
PMID: 33756041
4
SPTBN2 variants cause both adult-onset and infantile-onset spinocerebellar ataxia with extreme phenotypic heterogeneity depending on variant type
PMID: 37301203
5
SPTBN2 is one of the six most commonly mutated genes in ataxia patients, accounting for >40% of positive molecular diagnoses
PMID: 29915382
6
SPTBN2 is a neuronal spectrin whose pathogenic variants cause neurological disorders; spectrins function as molecular organizers at the cell membrane
PMID: 36697767
7
SPTBN2 is upregulated in pancreatic cancer and serves as a potential prognostic biomarker and immunotherapy target
PMID: 38684762
Disease Associationsβ“˜22
spinocerebellar ataxia type 5Open Targets
0.80Strong
autosomal recessive spinocerebellar ataxia 14Open Targets
0.75Strong
Spectrin-associated autosomal recessive cerebellar ataxiaOpen Targets
0.69Moderate
genetic disorderOpen Targets
0.51Moderate
cerebellar ataxiaOpen Targets
0.44Moderate
spinocerebellar ataxia type 14Open Targets
0.38Weak
Intellectual disabilityOpen Targets
0.26Weak
autosomal dominant cerebellar ataxiaOpen Targets
0.20Weak
autosomal recessive cerebellar ataxiaOpen Targets
0.16Weak
hereditary ataxiaOpen Targets
0.12Weak
hereditary spastic paraplegiaOpen Targets
0.12Weak
neoplasmOpen Targets
0.09Suggestive
hypertrophic cardiomyopathyOpen Targets
0.08Suggestive
ovarian cancerOpen Targets
0.08Suggestive
Spinocerebellar ataxia type 40Open Targets
0.08Suggestive
pancreatic adenocarcinomaOpen Targets
0.08Suggestive
Dysequilibrium syndromeOpen Targets
0.07Suggestive
Adult-onset autosomal recessive cerebellar ataxiaOpen Targets
0.07Suggestive
spinocerebellar ataxia type 35Open Targets
0.07Suggestive
spinocerebellar ataxia type 15/16Open Targets
0.07Suggestive
Spinocerebellar ataxia 5UniProt
Spinocerebellar ataxia, autosomal recessive, 14UniProt
Pathogenic Variants56
NM_006946.4(SPTBN2):c.1307T>C (p.Met436Thr)Likely pathogenic
not provided|Spinocerebellar ataxia type 5
β˜…β˜…β˜†β˜†2025β†’ Residue 436
NM_006946.4(SPTBN2):c.1309C>T (p.Arg437Trp)Pathogenic
Spinocerebellar ataxia type 5|not provided
β˜…β˜…β˜†β˜†2025β†’ Residue 437
NM_006946.4(SPTBN2):c.1596_1634del (p.Glu532_Met544del)Pathogenic
Spinocerebellar ataxia type 5|not provided
β˜…β˜…β˜†β˜†2024β†’ Residue 532
NM_006946.4(SPTBN2):c.5630dup (p.Ile1878fs)Pathogenic
not provided
β˜…β˜…β˜†β˜†2023β†’ Residue 1878
NM_006946.4(SPTBN2):c.1310G>A (p.Arg437Gln)Pathogenic
not provided|Spinocerebellar ataxia type 5
β˜…β˜…β˜†β˜†2022β†’ Residue 437
NM_006946.4(SPTBN2):c.1261_1263del (p.Glu421del)Pathogenic
not provided|Spinocerebellar ataxia type 5
β˜…β˜…β˜†β˜†2022β†’ Residue 421
NM_006946.4(SPTBN2):c.5991_5992del (p.Glu1997fs)Pathogenic
not provided|Autosomal recessive spinocerebellar ataxia 14
β˜…β˜…β˜†β˜†2020β†’ Residue 1997
NM_006946.4(SPTBN2):c.181A>G (p.Lys61Glu)Likely pathogenic
Cerebellar ataxia|not provided
β˜…β˜…β˜†β˜†2015β†’ Residue 61
NM_006946.4(SPTBN2):c.485T>C (p.Ile162Thr)Likely pathogenic
Spinocerebellar ataxia type 5
β˜…β˜†β˜†β˜†2025β†’ Residue 162
NM_006946.4(SPTBN2):c.194A>C (p.Lys65Thr)Likely pathogenic
Spinocerebellar ataxia type 5
β˜…β˜†β˜†β˜†2025β†’ Residue 65
NM_006946.4(SPTBN2):c.3867+1G>CPathogenic
not provided
β˜…β˜†β˜†β˜†2025
NM_006946.4(SPTBN2):c.5197C>T (p.Arg1733Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2025β†’ Residue 1733
NM_006946.4(SPTBN2):c.3436C>T (p.Arg1146Ter)Pathogenic
Autosomal recessive spinocerebellar ataxia 14
β˜…β˜†β˜†β˜†2024β†’ Residue 1146
NM_006946.4(SPTBN2):c.1896_1904del (p.Arg634_Arg636del)Likely pathogenic
Spinocerebellar ataxia type 5
β˜…β˜†β˜†β˜†2024β†’ Residue 634
NM_006946.4(SPTBN2):c.6160C>T (p.Arg2054Trp)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 2054
NM_006946.4(SPTBN2):c.6034+1G>APathogenic
not provided
β˜…β˜†β˜†β˜†2024
NM_006946.4(SPTBN2):c.1121G>T (p.Ser374Ile)Pathogenic
not provided
β˜…β˜†β˜†β˜†2024β†’ Residue 374
NM_006946.4(SPTBN2):c.4961T>C (p.Met1654Thr)Likely pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 1654
NM_006946.4(SPTBN2):c.6304G>T (p.Glu2102Ter)Pathogenic
Autosomal recessive spinocerebellar ataxia 14
β˜…β˜†β˜†β˜†2023β†’ Residue 2102
NM_006946.4(SPTBN2):c.4233C>A (p.Tyr1411Ter)Pathogenic
not provided
β˜…β˜†β˜†β˜†2023β†’ Residue 1411
View on ClinVar β†—
Related Genes
SPTBN5Protein interaction96%ACTBProtein interaction95%GRID2Protein interaction95%SLC1A6Protein interaction95%GRM1Protein interaction94%CACNA1AProtein interaction92%
Tissue Expression6 tissues
Bone Marrow
100%
Liver
94%
Brain
87%
Ovary
4%
Heart
3%
Lung
2%
Gene Interaction Network
Click a node to explore
SPTBN2SPTBN5ACTBGRID2SLC1A6GRM1CACNA1A
PROTEIN STRUCTURE
Preparing viewer…
PDB6ANU Β· 7.00 Γ… Β· EM
View on RCSB β†—
Constraintβ“˜
LOEUFβ“˜
0.45Moderately Constrained
pLIβ“˜
1.00Intolerant
Observed/Expected LoF0.39 [0.33–0.45]
RankingsWhere SPTBN2 stands among ~20K protein-coding genes
  • #3,704of 20,598
    Most Researched127 Β· top quartile
  • #1,227of 5,498
    Most Pathogenic Variants56 Β· top quartile
  • #2,529of 17,882
    Most Constrained (LOEUF)0.45 Β· top quartile
Genes detectedSPTBN2
Sources retrieved10 papers
Response timeβ€”
πŸ“„ Sources
10β–Ό
1
Heterozygous variants in SPTBN1 cause intellectual disability and autism.
PMID: 33847457
Am J Med Genet A Β· 2021
1.00
2
SPTBN2 suppresses ferroptosis in NSCLC cells by facilitating SLC7A11 membrane trafficking and localization.
PMID: 38241838
Redox Biol Β· 2024
0.90
3
Targeted exome analysis identifies the genetic basis of disease in over 50% of patients with a wide range of ataxia-related phenotypes.
PMID: 29915382
Genet Med Β· 2019
0.80
4
Spectrins: molecular organizers and targets of neurological disorders.
PMID: 36697767
Nat Rev Neurosci Β· 2023
0.70
5
Extreme phenotypic heterogeneity in non-expansion spinocerebellar ataxias.
PMID: 37301203
Am J Hum Genet Β· 2023
0.60