HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
25 sources retrieved · Most recent: April 2026 · Index updated 14 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
SRRT
serrate, RNA effector molecule
Chromosome 7 · 7q22.1
NCBI Gene: 51593Ensembl: ENSG00000087087.21HGNC: HGNC:24101UniProt: Q9BXP5
193PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Hub GeneTranscription Factor
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein-containing complexprotein bindingprotein-macromolecule adaptor activitymRNA cap binding complex bindingdengue diseasemyxedemahypothyroidismneurodegenerative disease
✦AI Summary

SRRT (serrate, RNA effector molecule) functions as a critical adapter protein at the nexus of RNA polymerase II transcription and RNA processing. SRRT mediates interactions between the cap-binding complex (CBC) and primary miRNA processing machinery by binding capped RNAs through its association with CBC component NCBP1 1. This positions SRRT as a molecular hub orchestrating competitive protein exchanges that determine RNA fate 2. SRRT plays dual roles in transcriptional regulation: it enables spliceosome recruitment to prevent premature transcript termination in embryonic stem cells, sustaining pluripotency 3, while also promoting neural stem cell self-renewal through SOX2 promoter regulation. SRRT contributes to RNA quality control by protecting functional transcripts from decay factors while allowing degradation of non-functional RNAs 4. Disease relevance includes prostate cancer, where high SRRT expression correlates with poor prognosis, higher Gleason scores, and genomic aberrations (PTEN loss, TP53 mutations) 5. SRRT is also implicated in Type 2 Diabetes through interaction with the T2D-GWAS gene JAZF1 6 and serves as a diagnostic biomarker in head and neck squamous cell carcinoma 7. Despite broad functional importance in cell proliferation and differentiation, SRRT candidate disease variants in inherited disorders await confirmation 8.

Sources cited
1
SRRT acts as a hub for competitive exchanges of protein factors determining RNA fate through CBC interactions
PMID: 34060620
2
SRRT sustains embryonic stem cell identity by preventing premature termination and facilitating U1 snRNP recruitment
PMID: 31953406
3
SRRT orchestrates quality control mechanisms sorting short RNAs between destructive and productive pathways
PMID: 39366352
4
High SRRT expression is associated with poor prognosis in prostate cancer and genomic aberrations
PMID: 37345203
5
SRRT interacts with cap-binding complex proteins NCBP1/2 and NCBP3 in ribonucleoprotein assemblies
PMID: 32960270
6
SRRT interacts with JAZF1, a Type 2 Diabetes GWAS gene involved in pancreatic function
PMID: 27752041
7
SRRT is upregulated in head and neck squamous cell carcinoma tissues with diagnostic value
PMID: 33732365
8
SRRT is a candidate disease gene in inherited disorders identified through exome sequencing
PMID: 28600779
Disease Associationsⓘ20
dengue diseaseOpen Targets
0.37Weak
myxedemaOpen Targets
0.24Weak
hypothyroidismOpen Targets
0.23Weak
neurodegenerative diseaseOpen Targets
0.23Weak
hair colorOpen Targets
0.19Weak
glioblastomaOpen Targets
0.09Suggestive
skin cancerOpen Targets
0.08Suggestive
skin neoplasmOpen Targets
0.08Suggestive
acute myeloid leukemiaOpen Targets
0.07Suggestive
Abnormality of the skeletal systemOpen Targets
0.07Suggestive
lagophthalmosOpen Targets
0.07Suggestive
neoplasmOpen Targets
0.06Suggestive
gliomaOpen Targets
0.05Suggestive
hepatocellular carcinomaOpen Targets
0.05Suggestive
prostate cancerOpen Targets
0.03Suggestive
diffuse large B-cell lymphomaOpen Targets
0.03Suggestive
cancerOpen Targets
0.03Suggestive
type 2 diabetes mellitusOpen Targets
0.02Suggestive
cholangiocarcinomaOpen Targets
0.02Suggestive
head and neck squamous cell carcinomaOpen Targets
0.02Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
DHX16Protein interaction100%DHX38Protein interaction100%ZFC3H1Protein interaction100%PHAXProtein interaction99%NCBP3Protein interaction99%CWC22Protein interaction97%
Tissue Expression6 tissues
Bone Marrow
100%
Ovary
55%
Liver
50%
Lung
40%
Heart
26%
Brain
16%
Gene Interaction Network
Click a node to explore
SRRTDHX16DHX38ZFC3H1PHAXNCBP3CWC22
PROTEIN STRUCTURE
Preparing viewer…
PDB5OO6 · 2.80 Å · X-ray
View on RCSB ↗
Constraintⓘ
LOEUFⓘ
0.40Moderately Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.30 [0.23–0.40]
RankingsWhere SRRT stands among ~20K protein-coding genes
  • #2,226of 20,598
    Most Researched193 · top quartile
  • #2,044of 17,882
    Most Constrained (LOEUF)0.40 · top quartile
Genes detectedSRRT
Sources retrieved25 papers
Response time—
📄 Sources
25▼
1
The landscape of genetic diseases in Saudi Arabia based on the first 1000 diagnostic panels and exomes.
PMID: 28600779
Hum Genet · 2017
1.00
2
ARS2/SRRT: at the nexus of RNA polymerase II transcription, transcript maturation and quality control.
PMID: 34060620
Biochem Soc Trans · 2021
0.90
3
Serrate RNA Effector Molecule (SRRT) Is Associated with Prostate Cancer Progression and Is a Predictor of Poor Prognosis in Lethal Prostate Cancer.
PMID: 37345203
Cancers (Basel) · 2023
0.80
4
Synergy and allostery in ligand binding by HIV-1 Nef.
PMID: 33787846
Biochem J · 2021
0.76
5
[Proteomic analysis of meibomian gland carcinoma cells after overexpression of thrombospondin 1].
PMID: 40302598
Zhonghua Yan Ke Za Zhi · 2025
0.72