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10 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
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SVOP
SV2 related protein
Chromosome 12 · 12q24.11
NCBI Gene: 55530Ensembl: ENSG00000166111.10HGNC: HGNC:25417UniProt: Q8N4V2
13PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Highly ConstrainedTransporter
DATA QUALITY
✓ Experimental GO Evidence✓ Swiss-Prot Reviewed
protein bindingtransmembrane transporter activityplasma membranesynaptic vesiclemyocardial infarctioneye injuryAbruptio PlacentaeBenign familial chorea
✦AI Summary

SVOP (SV2-related protein) is a transmembrane transporter-like protein localized to synaptic vesicles that functions as a nucleotide-binding protein with distinct biochemical properties. Structurally, SVOP belongs to the major facilitator family and shares similarity with SV2, though it exhibits unique nucleotide-binding characteristics, demonstrating highest affinity for NAD with a single binding site spanning transmembrane domains 9-12 1. Unlike SV2, SVOP's binding site differs in location and nucleotide specificity, suggesting independent evolution of nucleotide-binding capacity within transporter families 1. Developmentally, SVOP is expressed in the nervous system beginning at the mid-neurula stage and becomes broadly distributed throughout the central nervous system, suggesting roles in neuron formation, maturation, or neuronal function 2. Functionally, SVOP likely participates in neurotransmitter vesicle dynamics through its transporter activity, though its specific substrate remains incompletely characterized. Clinically, SVOP represents a novel disease susceptibility gene for depressive symptoms. Whole-exome sequencing in 296,199 UK Biobank participants identified SVOP among six newly discovered genes associated with depressive symptom scores, with enrichment analysis linking these genes to immune response pathways and brain regions implicated in depression including the anterior cingulate cortex and orbitofrontal cortex 3. These findings suggest SVOP may contribute to depression risk through mechanisms involving immune-neurological interactions, though further functional investigation is needed to establish the molecular pathways underlying this association.

Sources cited
1
SVOP identified as novel gene associated with depressive symptoms via exome-wide association study; linked to immune responses and depression-related brain regions
PMID: 39472661
2
SVOP is a nucleotide-binding protein with highest affinity for NAD, with binding site in transmembrane domains 9-12, distinct from SV2 binding properties
PMID: 19390693
3
SVOP is expressed in developing nervous system from mid-neurula stage onwards, suggesting involvement in neuron formation, maturation, or neuronal function
PMID: 16217738
⚠Limited data available — This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
eye injuryOpen Targets
0.28Weak
myocardial infarctionOpen Targets
0.28Weak
Abruptio PlacentaeOpen Targets
0.16Weak
Benign familial choreaOpen Targets
0.07Suggestive
hereditary persistence of fetal hemoglobin-sickle cell disease syndromeOpen Targets
0.06Suggestive
Hereditary persistence of fetal hemoglobin - beta-thalassemiaOpen Targets
0.06Suggestive
hemoglobin D diseaseOpen Targets
0.05Suggestive
Ataxia - oculomotor apraxia type 1Open Targets
0.05Suggestive
Autosomal dominant methemoglobinemiaOpen Targets
0.05Suggestive
delta-beta-thalassemiaOpen Targets
0.05Suggestive
Hemoglobin E - beta-thalassemiaOpen Targets
0.05Suggestive
hemoglobin E-beta-thalassemia syndromeOpen Targets
0.05Suggestive
alpha thalassemia-intellectual disability syndrome type 1Open Targets
0.05Suggestive
Alpha-thalassemia - intellectual disability syndrome linked to chromosome 16Open Targets
0.05Suggestive
Alpha-thalassemia - myelodysplastic syndromeOpen Targets
0.05Suggestive
alpha-thalassemia-myelodysplastic syndromeOpen Targets
0.05Suggestive
Hemoglobin C - beta-thalassemiaOpen Targets
0.05Suggestive
hemoglobin C-beta-thalassemia syndromeOpen Targets
0.05Suggestive
early-onset generalized limb-onset dystoniaOpen Targets
0.05Suggestive
dominant beta-thalassemiaOpen Targets
0.05Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
SLC43A3Shared pathway33%ABCB5Shared pathway33%SLC67A1Shared pathway25%ABCC10Shared pathway25%ABCC11Shared pathway25%SLC22A8Shared pathway25%
Tissue Expression6 tissues
Brain
100%
Liver
6%
Heart
6%
Ovary
2%
Lung
1%
Bone Marrow
0%
Gene Interaction Network
Click a node to explore
SVOPSLC43A3ABCB5SLC67A1ABCC10ABCC11SLC22A8
PROTEIN STRUCTURE
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AlphaFoldAI-predicted · UniProt Q8N4V2
View on AlphaFold ↗
Constraintⓘ
LOEUFⓘ
0.33Highly Constrained
pLIⓘ
1.00Intolerant
Observed/Expected LoF0.20 [0.13–0.33]
RankingsWhere SVOP stands among ~20K protein-coding genes
  • #16,323of 20,598
    Most Researched13
  • #1,358of 17,882
    Most Constrained (LOEUF)0.33 · top 10%
Genes detectedSVOP
Sources retrieved10 papers
Response time—
📄 Sources
10▼
1
Whole exome sequencing identified six novel genes for depressive symptoms.
PMID: 39472661
Mol Psychiatry · 2025
1.00
2
Structure-Function Correlation in Hemianopic Vision Loss in Children Aged 3-6 Years Using OCT and SVOP, and Comparison with Adult Eyes.
PMID: 29332093
Ophthalmic Res · 2018
0.90
3
Development of an Age-corrected Normative Database for Saccadic Vector Optokinetic Perimetry (SVOP).
PMID: 33264163
J Glaucoma · 2020
0.80
4
A case control study examining the feasibility of using eye tracking perimetry to differentiate patients with glaucoma from healthy controls.
PMID: 33436922
Sci Rep · 2021
0.70
5
Detection and characterisation of visual field defects using Saccadic Vector Optokinetic Perimetry in children with brain tumours.
PMID: 29880917
Eye (Lond) · 2018
0.60