HomeAboutRankingsData Sources
© 2026 GeneE
🧬
GeneE
3 sources retrieved · Most recent: April 2026 · Index updated 15 days ago
ⓘGeneE is for informational purposes only. It is not a substitute for professional medical advice, diagnosis, or treatment.
TCEAL3
transcription elongation factor A like 3
Chromosome X · Xq22.2
NCBI Gene: 85012Ensembl: ENSG00000196507.12HGNC: HGNC:28247UniProt: Q969E4
13PubMed Papers
20Diseases
0Drugs
0Pathogenic Variants
FUNCTIONAL ROLE
Transcription Factor
DATA QUALITY
✓ Swiss-Prot Reviewed
nucleusneurodegenerative diseaseuterine fibroidovarian carcinomalarge cell medulloblastoma
✦AI Summary

TCEAL3 (transcription elongation factor A like 3) is an X-linked transcriptional regulator involved in developmental and neurological processes. Primary function: TCEAL3 belongs to the Bex/Tceal transcriptional regulator family and is developmentally upregulated in retinal ganglion cells, where it suppresses axon regeneration after optic nerve injury 1. Mechanism: The protein modulates the mTOR pathway, which is critical for axonal regenerative capacity in central nervous system neurons 1. Disease relevance: TCEAL3 loss-of-function is associated with X-linked neurodevelopmental disorders; deletions encompassing TCEAL3 contribute to early-onset neurological disease characterized by hypotonia, intellectual disability, developmental delay, autistic-like behavior, and dysmorphic features 2. Clinical significance: TCEAL3 was identified as one of five discriminatory cyst fluid biomarkers (AUC >0.75) for stratifying malignant risk in intraductal papillary mucinous neoplasms of the pancreas; the combined five-protein model achieved 94% accuracy in distinguishing low-grade from high-grade/invasive lesions 3. These findings suggest TCEAL3 has dual roles in neurological development and potentially in pancreatic neoplasm progression, though further validation is needed for clinical application.

Sources cited
1
TCEAL3 is developmentally upregulated in retinal ganglion cells and suppresses axon regeneration; modulates mTOR pathway
PMID: 34560191
2
TCEAL3 loss-of-function/deletion associated with X-linked neurodevelopmental disorder with hypotonia, intellectual disability, and developmental delay
PMID: 36368327
3
TCEAL3 identified as discriminatory biomarker for pancreatic IPMN malignant risk stratification with AUC >0.75
PMID: 40300662
⚠Limited data available — This gene has 3 indexed publications. Summary and analysis may be incomplete.
Disease Associationsⓘ20
neurodegenerative diseaseOpen Targets
0.47Moderate
uterine fibroidOpen Targets
0.03Suggestive
ovarian carcinomaOpen Targets
0.02Suggestive
large cell medulloblastomaOpen Targets
0.01Suggestive
colorectal cancerOpen Targets
0.01Suggestive
cancerOpen Targets
0.00Suggestive
gastric cancerOpen Targets
0.00Suggestive
lung adenocarcinomaOpen Targets
0.00Suggestive
vulvar intraepithelial neoplasiaOpen Targets
0.00Suggestive
hepatitis B virus induced hepatocellular carcinomaOpen Targets
0.00Suggestive
myocardial infarctionOpen Targets
0.00Suggestive
hepatitis C virus induced hepatocellular carcinomaOpen Targets
0.00Suggestive
Crohn's diseaseOpen Targets
0.00Suggestive
Intellectual disabilityOpen Targets
0.00Suggestive
nervous system diseaseOpen Targets
0.00Suggestive
FibroadenomaOpen Targets
0.00Suggestive
ovarian cancerOpen Targets
0.00Suggestive
thyroid cancer, nonmedullary, 1Open Targets
0.00Suggestive
uterine corpus endometrial carcinomaOpen Targets
0.00Suggestive
Uveal MelanomaOpen Targets
0.00Suggestive
Pathogenic Variants
No pathogenic variants reported on ClinVar for this gene.
View on ClinVar ↗
Related Genes
TCEAL1Protein interaction73%TCEAL4Protein interaction73%BEX5Protein interaction70%
Tissue Expression6 tissues
Ovary
100%
Brain
72%
Heart
28%
Lung
24%
Bone Marrow
19%
Liver
6%
Gene Interaction Network
Click a node to explore
TCEAL3TCEAL1TCEAL4BEX5
PROTEIN STRUCTURE
Preparing viewer…
AlphaFoldAI-predicted · UniProt Q969E4
View on AlphaFold ↗
RankingsWhere TCEAL3 stands among ~20K protein-coding genes
  • #16,327of 20,598
    Most Researched13
Genes detectedTCEAL3
Sources retrieved3 papers
Response time—
📄 Sources
3
1
Cyst fluid proteins stratify malignant risk of intraductal papillary mucinous neoplasm of the pancreas.
PMID: 40300662
Cancer Lett · 2025
1.00
2
TCEAL1 loss-of-function results in an X-linked dominant neurodevelopmental syndrome and drives the neurological disease trait in Xq22.2 deletions.
PMID: 36368327
Am J Hum Genet · 2022
0.67
3
Developmentally upregulated transcriptional elongation factor a like 3 suppresses axon regeneration after optic nerve injury.
PMID: 34560191
Neurosci Lett · 2021
0.33